KEGG T00598: P9215

Prochlorococcus marinus MIT 9215: P9215_08171

Entry

P9215_08171 CDS T00598

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

pmh Prochlorococcus marinus MIT 9215

Pathway

pmh03410	Base excision repair
pmh03420	Nucleotide excision repair
pmh03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:pmh03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pmh03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pmh03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N mRNA_cap_enzyme DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

CyanoBase:

UniProt:

Position

complement(713451..715091)

AA seq 546 aa
MSLKKFSELFGDLDSINSTNNKIELLKSFFLSNEPIDNSWAIYLLTGKSNKRFISGRSLK
NIFSQIYEYPQWLIDTCYLKVGDSAEVITLLLKNKTSSRNKKLSNISLNELLSKTIPKLS
KLNEEEKNLEIKNLWETLPEDNHLIFNKILTGTFRVGVSIGLITKSISKLINIDEEIISH
RLMGNFKPSIDSYEFLINKNINLEELNSKPFPFLLANTFEDKIFKNSINNFQFEWKYDGI
RIQLIKRSGNVSLWTRGQELVNESFPELVEKMSHIKDNFVLDGELLVWNFKEKIPFDFHF
LQKRINRKSPTRSIQIKYPIIFIAYDLLEINGRDIREIKLKNRRIELEKYFSKWRNKAEN
NITDIFTICDLIYPKDWPDALTFKEKSRENNTEGLIIKNKMSSYTSGRKKGIWWKYKVDP
MQLDAVLIYAKGGSGRRAGLYTDYSFALWKGQELIKFASAYSGLTNIEIKELDKWIRKNT
IEKFGPVRSLKPEMVFEISFEKIQISKRHKSGIAVRFPRITKWRKDKKINDADSLENAYK
LMKKIS

NT seq 1641 nt +upstreamnt +downstreamnt
atgagcttaaaaaagttttcagaattatttggagatctagattcaattaatagtacaaat
aataaaattgaacttttaaaaagtttttttctatcaaatgaaccaatagataattcatgg
gcaatatatttactaactggaaaaagtaataagagatttattagtggaagatctttgaaa
aatattttttctcaaatatatgaatatcctcaatggttaattgatacatgttatttaaaa
gttggtgactcagctgaggtaataactttattacttaaaaataagacttcatcaagaaat
aagaaattatcaaatataagtctcaacgaattactaagcaaaacaatacctaagttatca
aaactaaatgaggaggaaaaaaatttagaaattaaaaatctttgggaaacattacctgaa
gataaccatctgatttttaataaaattcttacaggaacttttagagtaggagtctctatc
ggattaataacaaaatcaatatcaaaactaattaatattgatgaagagattatttctcat
aggttgatggggaatttcaaaccttcgattgattcatatgaatttttaattaacaagaat
attaatcttgaagaattaaattccaaaccatttccatttcttcttgcaaatacctttgaa
gataaaatcttcaaaaattcaataaataattttcaatttgaatggaaatacgatggtatt
aggattcaattaattaaaagatcagggaatgtttctttgtggacaagagggcaagaatta
gtcaatgaatctttcccagaattagtcgagaaaatgtcacatataaaagataattttgtt
cttgatggggaattattagtttggaattttaaagaaaaaattccctttgattttcatttt
cttcaaaaaagaataaatagaaaatctcctactagatcaatccaaataaaatatccaatt
atttttattgcatatgatcttttagagattaatggaagagatataagagaaattaaatta
aaaaatagaagaattgagttagaaaaatatttttcaaaatggcgaaataaagctgagaat
aatattactgatatttttacaatatgcgatttaatctatcctaaagattggcctgatgct
ttaacttttaaagaaaaatcaagagaaaataatactgaaggattaataattaagaacaaa
atgtcttcatacacatctggaaggaaaaaaggtatttggtggaaatataaagttgatcct
atgcaattggatgctgttttaatttatgctaaaggcggaagtggtagaagagcaggtctt
tatacagattatagttttgcattatggaaaggccaagaattaataaaatttgcaagtgca
tattctggtttaacgaatattgaaattaaagagctagataaatggataaggaaaaataca
atagaaaaatttggacctgttcgatcattgaaaccagaaatggtattcgaaatatctttt
gagaaaatacaaatttcaaaacgtcataagtctggaatagcagtaagatttccaagaata
acaaaatggagaaaagataaaaaaatcaatgatgctgatagcctagaaaatgcttataaa
cttatgaaaaaaatatcatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   CYANOBASE-PMH (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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