KEGG T00297: PMT9312

Prochlorococcus marinus MIT9312: PMT9312_0733

Entry

PMT9312_0733 CDS T00297

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

pmi Prochlorococcus marinus MIT9312

Pathway

pmi03410	Base excision repair
pmi03420	Nucleotide excision repair
pmi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:pmi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pmi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pmi03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

CyanoBase:

CYORF:

UniProt:

Position

complement(685111..686751)

AA seq 546 aa
MSLKNFSELFLDLDSSNSTNNKIEVLKNYFLSNDPIDNSWAINLLTGKSNKRFISGRYLK
NLFSQIYEYPEWLIDTCYLKVGDSAEVITLLLKNKSTSKKKKLSNISLNELLSKTIPDLS
KLNEEEKNFKIKNMWETLPEDNHLIFNKILTGTFRVGVSIGLITKSISKLINIDEEIISH
RLMGNFEPSIDSYEFLINKNINLQELNSKPFPFLLANTIEDKIFKHSINDFQFEWKYDGI
RMQLIKRSGNVSLWTRGQELVNESFPELVEKMSHIKDDFVLDGELLVWNFKEQIAFDFSF
LQKRINRKSPTRSIQLKYPIIFIAYDLLEINGRDIREIKLENRRIELEKYFSKWQNKTEN
DISDIFKICDLIFPKDWPDALTYREKSRENNTEGLIIKKKTSIYSPGRKKGIWWKYKVDP
MQLDAVLIYAKGGSGRRAGLYTDYSFALWKDQELIKFASAYSGLTNIEIKELDKWIRNNT
IEKFGPVRSLKPEMVFEISFEKIQISKRHKSGIAVRFPRITKWRKDKKINDADSLENAYA
LMKKIS

NT seq 1641 nt +upstreamnt +downstreamnt
atgagcttaaaaaatttttcagaattatttctagatttagattcaagtaacagcacaaat
aataaaattgaagttttaaagaattattttttatctaatgatccaatagataattcatgg
gcaataaatttactgactggaaaaagtaataagagatttattagcggaagatatttaaaa
aatcttttttctcaaatatatgaatatcctgaatggttaattgatacatgctatttaaaa
gttggtgattctgctgaggtaataacgttattacttaaaaataaaagtacttccaaaaaa
aagaaattatcaaatataagtctcaatgaattactaagcaaaaccatacctgatttatca
aaacttaatgaggaggagaaaaattttaaaattaaaaatatgtgggaaacattacctgaa
gataaccatctaattttcaataagattcttacaggaacttttagagtaggggtctctatc
ggattaatcacaaaatcaatatcaaaactaattaatattgatgaagagattatttcccat
aggttgatggggaattttgagccttcaattgattcatatgaatttttaattaacaagaat
atcaatcttcaagagttaaattccaaaccatttccatttcttctagcgaatactattgaa
gataaaatcttcaaacattcaataaatgattttcaatttgaatggaaatacgacggtata
aggatgcaattaattaaaagatcaggaaatgtttcgttatggacaagagggcaagaatta
gtcaatgaatcattcccagaattagtagagaaaatgtcgcatataaaagatgattttgtt
cttgatggtgaattattagtttggaattttaaagaacaaattgcgtttgatttttctttt
cttcaaaaaagaataaatagaaaatctcctactagatcaatccaattaaaatatccaatt
atttttattgcttatgatcttttagagattaatggaagagatataagagaaattaaatta
gagaatagaagaattgagttagaaaaatatttttcaaaatggcaaaataaaactgagaat
gatatctctgatattttcaaaatatgtgatttaatctttcctaaagattggcctgatgct
ttaacttatagagagaaatctcgagaaaataatactgaaggattaataattaagaaaaag
acttctatatactcccctggtcgaaaaaaaggcatttggtggaaatataaagttgatcct
atgcaactggatgctgttctaatttacgcaaagggcggtagcggtagaagagctggtctt
tatacagattacagttttgcattatggaaagaccaagaattaattaaatttgcaagtgca
tattctggtttaacaaatattgagatcaaagagctagataaatggataaggaacaataca
atagaaaaatttggtcctgttcgatcgttaaaaccagaaatggtatttgaaatatctttt
gagaaaatacaaatttcaaaacgtcataagtcaggcatagcagtaagatttccaagaata
acgaaatggagaaaagataaaaaaattaatgatgcagatagtctagagaatgcttatgca
ctgatgaaaaaaatatcatga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   CYANOBASE-PMI (1)   
   CYORF-PMI (1)   
   JGI-PMI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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