KEGG T00297: PMT9312

Prochlorococcus marinus MIT9312: PMT9312_1155

Entry

PMT9312_1155 CDS T00297

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

pmi Prochlorococcus marinus MIT9312

Pathway

pmi03410	Base excision repair
pmi03420	Nucleotide excision repair
pmi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:pmi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pmi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pmi03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_A_M WGR mRNA_cap_enzyme Imm6

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

CyanoBase:

CYORF:

UniProt:

Position

complement(1071098..1072192)

AA seq 364 aa
MKNEKISLSFTEGSSDKVYQAELKEVDGGFNVTFQYGRRGKPLQSGTKTKTPATYDDAKK
IYDKLVLSKTSKGYAPEDSSVEYAETEKAGESTDFKPQLLNPINNENLEELFNNFSRVYM
QTKHDGERRGASINNSEIIASNRKGLRVGLQKPIQDALEKLKDGGFIDTEIDSEDMGDHL
VIFDVLKFKGLETKENSFSDRVTYLEKLGEEIKSKKLDNALKVDYPTIADSLEKVKDFVE
SAKSKNEEGVVFKNGDATYNEGRPSSGGNALKLKFVESATLRVSSITEGKRSVSIEINDN
GIWISVGKCTVPANQDIPNPGELIEVDYLYAIKDGALFQPIYKGKRNDLDETAAVISQLK
YKKD

NT seq 1095 nt +upstreamnt +downstreamnt
atgaaaaacgaaaaaatatctttatctttcacagagggttcatctgacaaagtttatcaa
gcagaactaaaggaagttgatggtggttttaatgtgacctttcaatatggtcgaagagga
aaacccctccaaagtgggacaaaaacaaaaactcctgctacttatgatgatgcgaaaaaa
atatatgacaagttagtactatcaaaaacctcaaagggatatgcacctgaagatagttca
gttgagtatgcagagacagaaaaagctggagaatctactgactttaaacctcaattatta
aacccgattaataatgaaaatcttgaagaacttttcaataatttttctagagtttatatg
cagacaaaacatgatggagaacgtaggggcgcaagtattaataactcagaaatcattgca
tctaaccgcaaaggtttgcgagtaggtttgcagaaacctattcaggatgcactggaaaaa
ctaaaagacggagggtttatagatacagaaatagattctgaagacatgggggatcattta
gttatctttgatgttctcaagttcaaaggcttggaaactaaagaaaattcatttagcgat
cgtgttacttatcttgagaaacttggagaagaaatcaaatcaaaaaaacttgataatgct
ttaaaagttgattacccaaccattgcagatagcttagaaaaagttaaagattttgtagaa
agcgcaaaatcaaaaaatgaagagggagttgtttttaaaaatggagatgcaacatacaac
gaaggcagaccaagttctggaggaaacgctcttaagcttaaatttgtagaaagtgccacg
ctgcgtgtctcttcaattacggaaggtaagcgttctgtatctatcgaaataaatgataat
ggaatttggatatctgtaggtaagtgtacggttcctgctaatcaagatattccaaatcca
ggcgaattaattgaagtggattatctatatgccattaaagatggtgctctttttcaacct
atttataaaggaaagcgtaatgatctagatgaaactgcagctgtaatttctcagcttaaa
tataaaaaagattaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   CYANOBASE-PMI (1)   
   CYORF-PMI (1)   
   JGI-PMI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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