KEGG   Parvimonas micra: NW74_03110
Entry
NW74_03110        CDS       T03515                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pmic  Parvimonas micra
Pathway
pmic03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NW74_03110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmic03019]
    NW74_03110
   03016 Transfer RNA biogenesis [BR:pmic03016]
    NW74_03110
Enzymes [BR:pmic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     NW74_03110
Messenger RNA biogenesis [BR:pmic03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NW74_03110
Transfer RNA biogenesis [BR:pmic03016]
 Prokaryotic type
  tRNA degradation factors
   NW74_03110
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 PCB_OB S1_2
Other DBs
NCBI-ProteinID: AIZ36397
UniProt: A0A0B4S0K9
Position
657739..659853
AA seq 704 aa
MVREFIYDLSGRELKVTIGKVAEQANGSCLVQCGETVVLVNACASKEPREGVDFFPLSCD
FEEKLYSVGKIPGGFIKREGRPSEKSILTSRLIDRPLRPLFPEGYRNDVQVIATALSVEQ
DNQPDILAMIGSSIALTISDIPFNGPTGSVNVGYVDGEYIINPTIAQREKSRLNITVSGT
KDAIMMVEAGADILSEEEVLNAILFAHEEIKSICNFIETIREEIGKEKSEVIIKQRDEDL
FNAIIEFGKEQIISALRTPNKMEREENLDNITKEIFEKFLPDYEDKKGEINSAIESVIVD
EVRRLIIEEGIRPDDRELDEVRKISCERGLLPRTHGSGLFTRGQTQVLTLTTLGAPGEVQ
VLDGVIDEDDKRYMHQYNFPPFSVGDVRPLRSPGRREIGHGALAERALVPVLPSEEEFPY
TMRLVSEVLSSNGSSSQASICGSTLSLLDAGVPIKDSVAGIAMGLIKDEKTNKIAILTDI
QGLEDHFGDMDFKVAGTKDGITALQMDIKIDGISREILATALEKAKRARLHILSIMNDCI
ATPSEEMSKYAPKIFTMQILPEKIREVIGPGGKVINKIIDETGVKIDTFDDGRIAITADS
RENGERAKEMINEIVKEIEVGEIYSGVITTITNFGAFVELIKGKEGLLHISNMTHERLNK
VEDLFKVGDVVEVKVIEIDNQGKIKLSRKALLEKPKKDKEKEEK
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggttagagaatttatatatgacttaagtggaagagaacttaaagtaacaataggaaag
gttgcagaacaagcaaacggatcttgtcttgtacaatgtggagaaactgttgtattagta
aatgcttgtgcttctaaagaacctagagaaggagttgacttttttccattaagctgtgat
tttgaagaaaaactttattcagtaggaaaaattcctggtggatttattaaaagagaagga
cgtccaagtgaaaaatcaatattaacttccagactaatagacagaccgttacgtccactt
tttccggaaggatatagaaatgatgttcaagttattgcaacagcattatcagttgaacaa
gataatcaacctgatatacttgcaatgataggttcttctattgcacttacaatttcagat
attccttttaacggacctacaggatctgttaatgttggatatgttgatggggaatatatt
ataaacccgacaattgcacaaagagaaaaatcaagacttaatattacagtatcaggaaca
aaagatgctattatgatggttgaagcaggtgctgatattttaagtgaagaagaagtttta
aatgcaattcttttcgcacatgaagaaattaaatcaatttgtaattttatcgaaacaatt
agagaagaaataggtaaagaaaaatctgaagttattataaaacaaagagatgaagattta
ttcaatgcaattattgaatttggtaaagagcaaattatttctgctcttagaactccaaat
aaaatggaaagagaagaaaatttagacaatattacaaaagaaattttcgaaaagttttta
cctgattatgaagataaaaagggagaaattaattctgctatagaatcagtaatcgttgat
gaagttagaagattaataatagaagaaggaattagaccggatgatagagaacttgatgaa
gttagaaaaatttcttgtgaaagaggacttttaccaagaactcatggttcagggttattt
actagaggacaaactcaagttttaactttaacaactttgggagctcctggagaagttcaa
gttttagatggagttattgatgaagatgataagagatatatgcatcaatacaatttccct
ccatttagtgttggagatgttagacctttaagaagtccgggaagacgtgaaattggtcat
ggtgctttagctgaaagagctttagttcctgttttaccaagtgaggaagagtttccatat
acaatgagattagtttcagaagttttatcttcaaatggatcaagttcacaagcaagtatt
tgtggctcaacactttcattattggatgcaggtgttccaattaaagattctgttgcaggt
attgcaatgggacttataaaagatgaaaaaactaacaaaattgctattttaacagatatt
caaggtttagaagaccattttggagatatggactttaaagttgctggtactaaagatgga
atcactgctttgcaaatggatattaaaattgatggtattagtagagaaattttggcaacc
gcactagaaaaagctaaaagagcaagacttcacattttatcaattatgaatgactgtata
gcaactccaagtgaagaaatgtcaaaatatgctccaaagatatttactatgcaaatttta
ccagaaaaaattagagaagtaattggaccgggtggaaaagttatcaataagattattgat
gaaacaggagttaagattgatacttttgatgacggacgcattgcaattacagctgattca
agagaaaatggtgaaagagcaaaagaaatgattaatgaaattgttaaagaaattgaggtt
ggagaaatttacagtggtgtaattacgacaatcacaaattttggagcattcgttgaactt
attaaaggtaaggaaggcttacttcatatctcaaatatgactcacgaaagattaaataaa
gttgaagatttatttaaagttggagatgtagttgaagttaaagtaatagaaattgacaat
caaggaaagattaaattgtcaagaaaagccttacttgaaaaacctaaaaaagataaagaa
aaagaagaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system