KEGG   Parvimonas micra: NW74_06455
Entry
NW74_06455        CDS       T03515                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
pmic  Parvimonas micra
Pathway
pmic03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pmic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NW74_06455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmic03021]
    NW74_06455
   03400 DNA repair and recombination proteins [BR:pmic03400]
    NW74_06455
Enzymes [BR:pmic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NW74_06455
Transcription machinery [BR:pmic03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NW74_06455
DNA repair and recombination proteins [BR:pmic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NW74_06455
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 DUF5887
Other DBs
NCBI-ProteinID: AIZ36993
UniProt: A0A0B4S2D2
Position
complement(1375826..1379584)
AA seq 1252 aa
MTHTEKYGITERVSYSKIQNVLDLPNLIAIQTDSYDWFIKQGIRDVFDDISPIRDYSEAM
KLEFLNYRLENAPKYSEQECKDRDMNYSTLLKVDVRLTNNNTGEVKEQEVFMGEIPLMTD
NGTFIINGAERVIVSQLVRSPGVYYGEEIDKSGNKLFSSTVIPNRGAWLEYDTDTNGVVS
VRIDRTRKLPITTMIRALLYETNEEMVENFGDIKELHTTLEKDITKSYQEAILEIYRKLK
PGDPATVESGESLLHNLLFDPRRYDLAKVGRYKFNKKLALRNRLIGTILAEDIFKTDKFG
EMEKIASVGDYISEELAEKIENAGYKRVHVKVEDKEIIVVGNHFVDIGAFELGFDISCNG
LSEKVYYPVMMEILESASEYEGEEYETQVKRAVRNRVKELSPTHIIRDDIEATVSYEFNL
FYGLGICDDIDHLGNRRVRAVGELLQNQFRIGLSRMERVVRERMSTQDPDLATPQGLINI
RPLVASLKEFFGSSQLSQFMDQNNPLAELTHKRRLSALGPGGLSRDRAGYEVRDVHESHY
GRICPIETPEGPNIGLITSLTTYARVDQYGFIETPYRVVNNGIATKDIVYLTADEEDEVI
IAQANEPLDENGRFVNERVSGRGINGENDIYPRDTIQLMDVSPQQIVSVGTAMIPFLEND
DATRALMGSNMQRQAVPLLVTEAPIVGTGIEHKAARDSGVVIIAKNSGIVTKVDSDEIHI
KRDLDNVVDKYRLLKFKRSNQGTTINQRPIVNENDRINAGDIIADGPSTENGEIALGKNI
LMAFMNWEGYNYEDAMLLNEQLVIDDVLTSLHIEEHECEAREIKLGSEEITRDVINIGED
MRKNLDENGIIRIGAEVNSGDILVGKVSPKGETELSAEERLLRAIFGEKAREVRDTSLRV
PHGETGIVVDVKCYSRKNGDELPPGVNEVVRVYVATKRKINVGDKMCGRHGNKGVISRIM
PQEDMPFLPDGTPLQIVLNPLGVPSRMNIGQVLEVHLGLAAKRLGWKVATPVFDGASDID
VLDALKLAGCPESGKIKLRDGRTGDEFDNPVTVGYMYMLKLHHLVDEKIHARSIGPYSLV
TQQPLGGKAQFGGQRFGEMEVWALEAYGASHTLQEMLTVKSDDIVGRVKTYESIVKGVNI
PEPGIPESFKVLMKELQSLCLDVKLIDEEGEEIKLRENSDEIKAQLVLNEEYAKEEEEED
FDFDSFYDQSGNKEEDFDGFDLSFLEDKDEKGKSSSEKVEQDEIFIEEDIDQ
NT seq 3759 nt   +upstreamnt  +downstreamnt
atgacacatactgaaaagtatggaatcacagaaagggttagttattcaaaaattcaaaat
gttttggatcttccaaacctaattgccattcaaactgatagttatgattggtttattaag
caaggaattagagatgtttttgacgatattagtccaattagggactattccgaagcgatg
aagttggaatttttaaattatcgtttagaaaatgctccaaagtattcagaacaagaatgt
aaggatagggatatgaactattcaacacttctaaaagtagatgttcgtttaacaaacaat
aatacaggcgaagttaaagaacaagaagtgtttatgggagaaattcctttgatgactgac
aacgggacttttattattaatggtgctgaaagagttatcgtaagtcagcttgttagaagt
ccgggtgtatattatggagaagaaattgacaagtcaggtaataagttattttcttcaaca
gtaattccgaacagaggtgcttggttagaatatgataccgacacaaacggagttgtaagt
gttcgtattgaccgaacaagaaaattgcctataacaactatgattagggcgttgttatat
gaaacaaatgaagaaatggttgaaaatttcggagatattaaagaacttcatactactttg
gaaaaagatataacaaagagttatcaagaagctattcttgaaatttatagaaaattaaaa
cctggagatcctgctactgttgaaagtggggaaagtttattacataatttacttttcgat
ccaagaagatatgatcttgcaaaagttggtagatataaatttaataagaaattagcttta
agaaatagattaataggaacaattttagctgaagatattttcaagactgataaattcggt
gaaatggaaaaaattgcaagtgttggagattatatttcagaagaacttgctgaaaaaatt
gaaaatgcaggatataagagagttcatgtaaaagttgaagacaaagagattatcgttgtt
ggtaaccactttgttgatattggtgcgtttgaattgggatttgacatttcatgcaatgga
ctttcagaaaaagtttattatccagttatgatggaaattttagaatctgcatcagaatat
gaaggcgaagaatatgaaacacaagttaagagagctgttagaaatagagttaaagagctt
tctcctactcatattattcgtgatgatattgaagctactgtaagttatgaatttaactta
ttctatggtcttggaatttgtgatgatattgaccatttaggaaatagaagagttagagct
gttggagaacttttacaaaatcaatttagaattggtttatcaagaatggagagagttgtt
agagaaagaatgtcaactcaagatccagaccttgctacgcctcaaggacttattaatata
agacctcttgttgcgtctttaaaagaattctttggttcttcacaattatcacaattcatg
gatcaaaacaatccacttgcagaacttactcataagagaagattatcagcattaggacct
ggtggtcttagtagagatagagcaggatacgaagtaagagacgttcatgaaagtcactac
ggaagaatttgtccgatagaaactccagaaggtccaaacatcggtcttattacttctctt
acaacttatgcaagagttgatcaatatggatttattgaaacaccatatcgtgttgtaaat
aatggaattgctacaaaggacattgtttatttaactgctgatgaagaagatgaagttatt
atcgctcaagccaatgaaccacttgatgaaaatggacgttttgtaaacgaaagagtaagt
ggtcgtggtattaatggcgaaaatgatatttatccaagagatacaattcaacttatggac
gtttctcctcaacaaattgtatcagttggtacagcaatgattcctttccttgaaaatgac
gatgctactcgtgcgttgatgggttcaaacatgcaaagacaagcagtgcctctacttgtt
actgaagctcctattgtaggaactggtatagaacataaagcggcaagagatagtggtgtt
gttatcattgctaaaaattcaggaattgttacaaaagttgatagtgatgaaattcatatt
aaaagagatttagataatgtagttgataaatatagattacttaaatttaaacgttcaaat
caaggaacaacaattaatcaaagacctatagttaatgaaaatgatagaattaatgcaggg
gatattattgccgatggtccttcaacagaaaatggagaaattgcattaggtaaaaatatt
ttaatggcatttatgaactgggaaggttataactacgaagatgcgatgttgttaaatgaa
caacttgttatagatgatgttttaacttcattacacattgaagaacatgaatgtgaagcg
agagaaatcaaattaggttctgaagaaatcacaagagatgttataaatatcggtgaagat
atgagaaagaacttagatgaaaatggtattatcagaattggtgctgaagttaattcgggg
gatatcttggttggtaaagtatcacctaagggagaaactgaattaagcgcagaagaaaga
cttttaagagctattttcggagaaaaagctagagaagtaagagatacttctttaagagtt
cctcatggagaaactggtattgttgtagatgttaaatgttatagtagaaaaaatggagat
gaattaccaccaggagttaatgaagtggttagagtttatgtagccactaagagaaagatt
aatgtaggggataaaatgtgtggtagacatggtaacaaaggggttatttcaagaataatg
cctcaagaagatatgccattcttaccggatggaactcctttacaaatcgttcttaatccg
ttaggggtaccttctcgtatgaacatcggacaagtacttgaagtgcatttaggacttgca
gctaaaagacttggttggaaagttgcaacacctgtatttgacggagcaagtgatattgat
gttcttgatgcattaaagcttgctggttgtcctgaatcaggaaaaataaaacttagagac
ggaagaactggagatgaatttgataatcctgtaactgttggttatatgtatatgttaaaa
cttcaccatttagtagatgaaaagattcatgctagatctatcgggccttattctttagtt
acacaacaaccacttggtggtaaggcacaatttggtggacaaagatttggagaaatggaa
gtttgggcattggaagcatacggtgcaagtcatactttacaagaaatgctaactgttaag
agtgacgacattgtaggtagagttaagacttatgaatcaattgttaagggtgtaaatatt
cctgaaccaggtattcctgaatccttcaaagttcttatgaaagaattacaatcattatgt
ttagatgttaaattgattgatgaagaaggagaagaaatcaaacttagagaaaattccgat
gaaattaaggctcaacttgttttaaatgaagagtatgccaaagaagaagaggaagaagat
tttgactttgattcattttatgatcaatctggaaataaggaagaagattttgatggcttt
gaccttagtttcttagaagataaagatgaaaaaggaaaaagcagttcagaaaaagtagaa
caagacgaaatatttatagaagaagatattgatcaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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