KEGG   Pseudomonas mendocina NK-01: MDS_4104
Entry
MDS_4104          CDS       T01473                                 
Name
(GenBank) rRNA large subunit methyltransferase
  KO
K00783  23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Organism
pmk  Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmk03009]
    MDS_4104
Enzymes [BR:pmk01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.177  23S rRNA (pseudouridine1915-N3)-methyltransferase
     MDS_4104
Ribosome biogenesis [BR:pmk03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    MDS_4104
SSDB
Motif
Pfam: SPOUT_MTase
Other DBs
NCBI-ProteinID: AEB60135
Position
complement(4509119..4509586)
AA seq 155 aa
MRIKLIAVGSRMPRWVEEGWQEYVKRLPAELPLELVEIPLNTRGKNADVARLIRQEGEAM
LSKVQPGERIVTLEVHGKPWSTEQLAAELDRWRLDARNVNLMVGGPEGLAPEVCARSEQR
WSLSPLTLPHPLVRILLGEQIYRAWTVLSGHPYHK
NT seq 468 nt   +upstreamnt  +downstreamnt
gtgcggatcaaactgatcgccgtcggttcgcgcatgccgcgttgggtcgaggagggctgg
caggagtacgtcaagcgcctgccggccgagttgccgctggaactggtggaaattcccctc
aacacccgtggcaagaacgccgacgtcgcccgcctgatccgtcaggagggcgaggccatg
ctgagcaaggtgcagcccggcgaacgtatcgtcacgctggaggtccatggcaagccatgg
agcaccgagcaactggcggcagagctggaccgctggcgtctcgacgcacgcaacgtcaac
ctcatggtcggcggcccggaagggctggcgccggaggtctgcgcgcgcagtgaacagcgt
tggtcgctgtcgccgctgaccctgccgcatccgctggtgcgcatcctgcttggcgagcag
atctaccgagcctggaccgtattgtccggtcacccgtaccacaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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