KEGG   Pseudomonas mendocina NK-01: MDS_4518Help
Entry
MDS_4518          CDS       T01473                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pmk00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    MDS_4518
Enzymes [BR:pmk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MDS_4518
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MDS_4518
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(4951495..4952307)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDIRLSGQRIECVERRAKYL
LIKAEVGSLIGHLGMSGSLRLVECGLAAAKHEHVDIELESGLALRYTDPRRFGALLWSED
PLRHELLSKLGPEPLGGLFDGERLFQMSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGSISRARYLRLAEEIKRILTHAIERGGTTLRDFVGGDGQPGYFQQELFAYGR
GGEFCKVCGSTLREVKLGQRASVYCPKCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaattgcctgaagtcgaaactacccgccgaggtatcgccccctatcttgaaggt
cagcgcgtcagccgcgtgatcgtgcgcgaacgtcgcctgcgctggccgatccccgaggac
ctcgacattcgcctgtccggccagcgtatcgagtgcgtcgaacgacgcgccaagtacctg
ctgatcaaggccgaagtcggcagtttgatcggccatctggggatgtccggcagcctgcgt
ctggtggaatgcgggctggccgcagccaagcatgagcatgtggatatcgaactggagtcc
ggtctggcgttgcgttataccgatccgcgtcgcttcggtgcactgctctggagcgaagat
ccgctgcgccacgaactgctcagcaagctcggtccggagccgctgggcgggcttttcgat
ggcgagcggctgttccagatgtcgcgtgggcgcagcatggcggtcaaaccgttcatcatg
gacaacgccgtggtggtgggcgtgggtaacatttacgccaccgaagcgctattcgctgcc
ggtatcgacccgcgccgcgaagccggttcgatctcgcgggcacgctatctgcgcctggcc
gaggagatcaaacgcatcctcacccatgccatcgagcgtggcggcaccacgctgcgcgac
ttcgtcggaggtgatggtcagcccggctacttccagcaggagctgttcgcctacgggcgt
ggcggtgagttctgcaaggtctgtggcagcacgctgcgtgaagtcaaattggggcagcgg
gcgagtgtctactgtcccaagtgtcaacgctga

DBGET integrated database retrieval system