KEGG   Prochlorococcus marinus subsp. pastoris CCMP1986: PMM0285
Entry
PMM0285           CDS       T00142                                 
Symbol
phr
Name
(GenBank) putative DNA photolyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
pmm  Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:pmm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmm03400]
    PMM0285 (phr)
Enzymes [BR:pmm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     PMM0285 (phr)
DNA repair and recombination proteins [BR:pmm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    PMM0285 (phr)
 Prokaryotic type
    PMM0285 (phr)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: CAE18744
UniProt: Q7V310
Position
complement(274511..275947)
AA seq 478 aa
MNKPRILFWHRKDLRIFDNQALIKAFSLSDAITSTYIFDKNYSHDFNASSRAWFLGNSLQ
ELGNNWKKMGSRLVLEEGDPVLIIPQLAKKIDAKFVFWNRSIEPYEINRDLEIKNNLKEQ
NIQVIETWDHLLIEPLKIFSGNNNPYSVYGPFYKNLKSKINLLGSFEQDKVVFQFKDIDN
KFKENKAINSSDSVLEKFIKNIKFPGSNICPCRPGENAAQTLLENFINEKKIYSYNSARD
FPSHNGTSFLSASLRFGTISIRKVWNATLNLNSDFANQENYLSIETWQKELVWREFYQHC
LFHFPELEKGPYRKKWDHFPWQNNNELFQHWSNGETGVPIVDAAMRQLNSTGWMHNRCRM
IVASFLVKDLICSWQMGEKKFMETLVDGDLAANNGGWQWSASSGMDPKPLRIFNPYTQAK
KFDPICEYIKYWIPELSRVSNSELLNGEISNLEKNNYSSPIVNHNIQQRLFKSLYAEI
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgaataaacctagaatacttttttggcatagaaaggatttaagaatatttgataatcaa
gctttaatcaaagcattttcattatcagatgctattacttcaacttatatatttgataaa
aattactcacacgatttcaatgcaagttcaagagcttggtttctaggaaattcgcttcaa
gaattaggaaataattggaaaaaaatgggtagtagattagttttggaagaaggagatccg
gtattaataattcctcaattagcaaagaaaatagatgctaaatttgttttttggaataga
tcaattgaaccttatgagattaatcgagatttagaaataaaaaataatttaaaagaacaa
aatattcaagttattgaaacttgggatcacttattaatagaacctttaaaaatattttca
gggaataataatccttattcagtttatggacctttttataaaaaccttaaatcaaaaatt
aatttattaggttcatttgaacaagataaagttgttttccagtttaaagatatagataat
aaattcaaagaaaataaggcaataaattcatctgattcggttctagagaaatttatcaaa
aatatcaaatttcctggttcgaatatttgtccatgtagacctggagagaatgctgcgcaa
acattattagaaaacttcattaacgaaaaaaaaatatattcttataattctgcaagagat
tttccttcacataatgggacatcatttctaagtgcatctctcagattcggcaccatcagc
attagaaaagtttggaacgctacattaaatttaaattcagattttgcaaatcaagaaaat
tacctatcaattgaaacatggcaaaaagaacttgtttggcgtgaattttatcaacattgc
ttattccatttcccagagctagagaaaggtccatatagaaaaaaatgggatcactttcca
tggcaaaacaataatgaattgtttcaacattggagcaacggagagaccggagtacctata
gttgatgctgcaatgcgtcaacttaatagtactggctggatgcataatagatgtaggatg
atagtcgcttcatttctggtaaaagatcttatatgcagttggcaaatgggcgagaaaaaa
tttatggagacgttggttgatggagacttagctgcaaataatgggggatggcagtggagc
gccagtagcggtatggatccaaaaccacttagaatttttaatccatatacccaagcaaaa
aaatttgatcctatttgcgaatatataaaatattggattcctgaattatctagagtgtca
aattcagaattattaaatggggagatatctaatttagaaaaaaataattattcaagccct
atcgtcaatcacaacatacaacaaagattatttaaatcactttatgctgaaatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (333)   
   KEGG ORTHOLOGY (1)   
   RefGene (330)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (341)   

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