KEGG   Prochlorococcus marinus NATL2A: PMN2A_0424
Entry
PMN2A_0424        CDS       T00267                                 
Name
(GenBank) NAD-dependent DNA ligase N-terminus protein
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
pmn  Prochlorococcus marinus NATL2A
Pathway
pmn03030  DNA replication
pmn03410  Base excision repair
pmn03420  Nucleotide excision repair
pmn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PMN2A_0424
   03410 Base excision repair
    PMN2A_0424
   03420 Nucleotide excision repair
    PMN2A_0424
   03430 Mismatch repair
    PMN2A_0424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmn03032]
    PMN2A_0424
   03400 DNA repair and recombination proteins [BR:pmn03400]
    PMN2A_0424
Enzymes [BR:pmn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     PMN2A_0424
DNA replication proteins [BR:pmn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PMN2A_0424
DNA repair and recombination proteins [BR:pmn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     PMN2A_0424
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PMN2A_0424
   MMR (mismatch excision repair)
    DNA ligase
     PMN2A_0424
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      PMN2A_0424
SSDB
Motif
Pfam: DNA_ligase_aden DUF5093
Other DBs
NCBI-ProteinID: AAZ57916
UniProt: Q46KR2
Position
959226..959912
AA seq 228 aa
MREEIEVSNHLVRNLERISPDNSIFNYKSGRNAFLSLGQGNIREWLEIFLPNTRIILEPK
IIGSIIGIQYINGELNKVINKNSQDITESVRSLKTIPKSLAIKNRLEIQGVLYDYKNLST
RKNETEFIDIQNFISKSKRLKFCAFQICQCNINHFQSLQELKHLNFEIPQTQFTNFISDI
EIYIQCWREGKLFTSYPTNGLVLKINSRKLQKYLGENNLSIPWAYAIN
NT seq 687 nt   +upstreamnt  +downstreamnt
atgagagaagagattgaggtatcaaatcaccttgtaaggaatcttgagagaatatctcca
gacaattctatctttaattacaaatctggaagaaatgccttcttatcattaggacaagga
aatattcgtgaatggttggagatatttcttccgaatacaagaataattttagaaccaaaa
atcattggatcaatcattggcattcaatatatcaatggagaattaaacaaggtcataaat
aaaaatagtcaagacattacagaaagtgtaaggtctcttaaaactattcctaaaagccta
gcgattaaaaacagacttgaaatacaaggagttctttacgactataaaaatttatcaact
agaaaaaatgaaactgaatttatagatattcaaaattttatatcaaagtctaaaagactt
aaattctgcgcttttcaaatatgtcaatgcaatattaatcattttcaatcacttcaggaa
ttaaaacatctaaattttgaaattcctcaaactcaatttacaaacttcatttctgatatc
gaaatctatattcaatgttggagagagggtaagttatttacaagctatccaacaaatgga
ctagtattgaaaatcaattcaagaaaattgcaaaagtatcttggagaaaataacctatca
ataccttgggcatacgccataaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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