KEGG   Pseudomonas soli: O165_019670
Entry
O165_019670       CDS       T03276                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pmos  Pseudomonas soli
Pathway
pmos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O165_019670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmos03019]
    O165_019670
   03016 Transfer RNA biogenesis [BR:pmos03016]
    O165_019670
Enzymes [BR:pmos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     O165_019670
Messenger RNA biogenesis [BR:pmos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     O165_019670
Transfer RNA biogenesis [BR:pmos03016]
 Prokaryotic type
  tRNA degradation factors
   O165_019670
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 S1_2
Other DBs
NCBI-ProteinID: AIN60395
UniProt: A0A1H9S3T8
Position
complement(4174329..4176434)
AA seq 701 aa
MNPVIKQFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKHADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTESAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVKELAAEAAKPTWDWKPAVAN
TELFNAIRAEFGEAVSQGYTITVKADRYARLGELRDQAIAKFSGEEGQPSAGEVKDIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGESRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAADAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDVLKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq 2106 nt   +upstreamnt  +downstreamnt
gtgaacccggtaatcaagcaattccagttcggtcaatcgaccgttaccctcgaaacgggc
cgcattgcccgtcaggccaccggcgccgtgctggtcaccgtcgacaacgatgtcactgtg
ctggtgaccgtggtcggtgccaagcatgccgatccgagcaagggcttcttcccgctgtcc
gtgcactaccaggaaaagacctacgccgctggcaagatcccaggtggtttcttcaagcgt
gaaggccgcccatccgaaaaagaaaccctgacttcgcgcctgatcgaccgcccgatccgc
ccgctgttccctgaaggtttcatgaacgaagtgcaggttgtctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tcgggcattccgttcgaaggcccgatcggcgccgcccgcgttgccttccacgaaagcacc
ggctacctgctgaacccgacctacgagcagcaggccgcttcgagcctggacatggtcgtt
gccggtaccgagtcggccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgatgaattccaggccgtgatcaaggctgtc
aaagagctggctgccgaagccgccaagccgacctgggactggaaacctgccgttgccaac
accgaactgttcaacgccatccgcgccgagttcggcgaagcggtgtcgcaaggctacacc
atcaccgtcaaggccgaccgctacgcgcgcctgggcgagctgcgcgatcaggcgatcgcc
aagttctccggtgaagaaggccagccatcggccggtgaagtcaaagacatcttcggcgag
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggtcgc
gacaccaagaccgtgcgcccgctgaacatcgaagtcggcgttctgccgaagacccacggt
tcggccctgttcacccgtggcgaaacccaggccctggtcgtcgcgaccctgggtaccgcc
cgtgacgcccagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgttctcggtaggtgagtgtggtcgcatgggcggtgctggccgtcgt
gaaatcggccacggccgtttggcccgtcgttcggtacaggccatgctgccggccgctgac
gtgttcccgtacactatccgcgtagtatcggaaatcaccgagtccaacggctccagctcc
atggcttcggtctgcggtgcctccctggcgctgatggacgcgggcgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggtcaaggaaggcgagaagttcgccgtactgacc
gacatcctgggtgacgaagaccacctcggcgacatggacttcaaggtagccggtaccgcc
aaaggcgtcaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcggcgagtcgcgtaccgagctgtcggccaacgcaccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgccaccattcgcgccatc
tgcgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagccgcggacgctgccaagcagcgcatcctgggcatcaccgccgaggcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggtgccttcgtc
aacatcctgccgggcaaggacggcctggtgcacatctccatgctgagcgatgctcgcgtc
gagaaggtcaccgacgtgctgaaggaaggccaggaagtcgaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgttgccgctgccaaggcatcgggc
gtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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