KEGG   Pseudomonas soli: O165_026405
Entry
O165_026405       CDS       T03276                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pmos  Pseudomonas soli
Pathway
pmos03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    O165_026405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmos03021]
    O165_026405
   03400 DNA repair and recombination proteins [BR:pmos03400]
    O165_026405
Enzymes [BR:pmos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     O165_026405
Transcription machinery [BR:pmos03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     O165_026405
DNA repair and recombination proteins [BR:pmos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      O165_026405
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AIN61667
UniProt: A0A1H9SP14
Position
5666745..5667746
AA seq 333 aa
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQTDEDESRSIGRLQLDASFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgcagatttcggtaaatgagtttctgacaccccgtcacatcgacgtgcaggttgtcagt
ccaacccgcgccaagatcacgctcgagcctctcgagcgtggcttcggccataccctgggc
aacgcgctgcgccgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
atcgatggcgtactccacgagtactccgcgatcgaaggtgtacaggaagacgtcattgaa
atcctgttgaacctgaaaggcctggctatcaaactgcacggtcgtgacgaagttacgctg
accttgtcgaaaaagggttcgggggtggttaccgctgccgatattcagctggatcacgat
gtcgagatcgtcaaccccgatcacgtaatcgcgaacctggcgtccaacggcgccctgaac
atgaagctcactgtagctcgtggtcgcggttacgagccggccgactcccgtcagaccgac
gaagacgaaagccgcagcattggccgtctccagctggacgcctcgttcagcccggtgcgt
cgtatcgcctacgtggtcgagaacgcccgtgttgagcagcgtaccaacctggacaagctg
gtcatcgatctggaaaccaacggtaccctggatcctgaagaggccatccgtcgtgccgcg
accatcctgcaacagcagctggccgcgttcgtcgacctcaaaggtgacagcgagccggtt
gtggtcgagcaggaagacgagatcgatccgatcctgctgcgcccggttgacgacctggaa
ctgaccgtacgttcggccaactgcctcaaggcggagaacatctactacatcggcgacctg
attcagcgtaccgaagtagagctgttgaagactcctaacctgggcaagaagtccctgact
gaaatcaaggacgtcctggcctcccgtggtctgtctctcggcatgcgcctcgacaactgg
ccgcctgcaagccttaagaaagacgacaaggcgactgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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