KEGG T01757: PM3016

Paenibacillus mucilaginosus 3016: PM3016_5352

Entry

PM3016_5352 CDS T01757

Definition

putative DNA ligase-like protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

pmq Paenibacillus mucilaginosus 3016

Pathway

pmq03410	Base excision repair
pmq03420	Nucleotide excision repair
pmq03430	Mismatch repair
pmq03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:pmq03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pmq03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pmq03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:pmq03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

379723073

NCBI-GeneID:

11887342

UniProt:

H6NB87

Position

complement(6384547..6385458)

AA seq 303 aa
MLLTAIAPMTAEAAGEPFDDEAFLFEPKWDGGRLLLHKQGERCEIYTRSGRIVTEKLPEL
REALADLPVRSVLLDGEGIVLRGGRPVFDDWAYRLRISQAAKIRTARQTHPVVFAAFDVL
CTDRPHLEEPLTQRKARLGELLQRGGGILTPTVSVEAQGRRLYELTAAQELEGIVAKRKT
SLYIPGRRSSDWIKIKHPRLIDTVILGCRSEPFELVVGLQFRTVKNKPVGRVSKGLTVED
RDRFLQAARELRVRQEGGVQWIEPRLCCRISYRDRSEMHQLEDTEFLAFLWDKQPEECVW
PYT

NT seq 912 nt +upstreamnt +downstreamnt
atgctgttgacggcaatcgccccgatgacggctgaggcggcgggcgagcccttcgatgac
gaggcgttcctgttcgaacccaagtgggacggagggcgcctgctgctgcacaagcagggg
gaacgctgcgagatctatacgcgaagcgggcgcatcgtgaccgagaagctgccggagctg
cgggaggctctggcggacctcccggtccgctccgtcctcctcgacggcgagggcatcgtg
ctgcgcggcggccgtcccgtcttcgacgattgggcgtaccggctgcggatcagccaggcc
gccaagatccgtaccgcccgccagacgcatccggtcgtcttcgcggcctttgacgtgctc
tgcacggaccggccgcatctggaggagccgctgacgcagcgcaaggcccggctcggggag
ctgctgcagcgaggcggcgggatcctcacgcctaccgtgtcggtggaagcccagggccgc
cggctgtacgagctgacggccgcgcaggagctggaggggatcgtggcgaaacgcaagacc
tccctctacataccgggccgccgaagctccgattggatcaagatcaagcacccgcgcctg
atcgacacggtcatcctgggctgccgctccgagccgtttgagctggtggtcggcctgcag
ttccgcaccgtgaagaacaaaccggtgggccgggtctccaagggcctcacggtggaggac
cgggatcgctttcttcaggctgcccgggagctgcgtgtgcggcaggagggaggggtccag
tggattgagccccggttgtgctgccggatctcataccgggaccgaagcgagatgcaccag
ctcgaagatacggaattcttagccttcctgtgggataagcagccggaggaatgtgtatgg
ccctatacgtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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