KEGG   Prochlorococcus marinus MIT 9313: PMT_1507
Entry
PMT_1507          CDS       T00143                                 
Name
(GenBank) RNA polymerases beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
pmt  Prochlorococcus marinus MIT 9313
Pathway
pmt03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pmt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PMT_1507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmt03021]
    PMT_1507
   03400 DNA repair and recombination proteins [BR:pmt03400]
    PMT_1507
Enzymes [BR:pmt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PMT_1507
Transcription machinery [BR:pmt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PMT_1507
DNA repair and recombination proteins [BR:pmt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PMT_1507
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45
Other DBs
NCBI-ProteinID: CAE21682
CyanoBase: PMT1507
UniProt: Q7V5P1
Position
complement(1593258..1596551)
AA seq 1097 aa
MSSSAIQVAKTATYLPDLVEVQRASFKWFLDEGLIEELDSFSPITDYTGKLELHFVGNEY
RLKRPRHDVEEAKRRDATFASQMYVTCRLVNKETGEIKEQEVFIGELPLMTERGTFIING
AERVIVNQIVRSPGVYFKDEQDKNGRRTYNASVIPNRGAWLKFETDKNDLLHVRVDKTRK
INAHVLMRAMGLSDNDVIDKLRHPEYYKKSIEAANEEGISSEDQALLELYKKLRPGEPPS
VSGGQQLLQTRFFDPKRYDLGRVGRYKINKKLRLTIPDTVRTLTHEDVLSTLDYLINLEL
DVGGASLDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIKERMTVGETDSLTPAQLVNP
KPLVAAVKEFFGSSQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAGFAVRDIHPSHY
GRLCPIETPEGPNAGLINSLATHARVNQYGFIETPFWKVENGRLIKEGDPIYLSADLEDE
CRVAPGDVATDADGQILAELIPVRYRQDFEKVPPEQVDYVQLSPVQVISVATSLIPFLEH
DDANRALMGSNMQRQAVPLLRPERPLVGTGLETQVARDSGMVPISRVNGMVTFVDATAII
VRDEDGVDHTHYLQKYQRSNQDTCLNQRPIVCQGDAVIVGQVLADGSACEGGEIALGQNV
LVAYMPWEGYNYEDAILVSERLVKDDLYTSVHIEKYEIEARQTKLGPEEITREIPNVAEE
SLGNLDEMGIIRIGAFVESGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRV
PSTERGRVVDVRIYTREQGDELPPGANMVARVYVAQRRKIQVGDKMAGRHGNKGIISRIL
PREDMPFLPDGTPVDIVLNPLGVPSRMNVGQVFECLMGWAAANLDCRVKVVPFDEMYGAE
KSQQTVEAYLKEAAKQPGKEWVYNPDNPGKLQLIDGRSGEPFDQPVTVGYAQILKLVHLV
DDKIHARSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWALEAYGAAYTLQELLTVKSDDMQ
GRNEALNAIVKGKPIPRPGTPESFKVLMRELQSLGLDIAVYTDEGKEVDLMQDVNPRRST
PSRPTYESLGVADYDED
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgagcagcagcgcgattcaggtcgccaagaccgccacctacctgcctgatctcgttgaa
gttcagcgggcgagcttcaagtggtttcttgatgagggcttgatcgaggagttggatagc
ttttctcccatcactgactacacaggcaagcttgaactccattttgttggcaatgaatac
cgattgaagcggcctcgccacgatgttgaagaggccaagcgccgtgatgcgactttcgct
tcacagatgtatgtgacctgtcgcttagtgaataaggaaacaggtgagattaaggagcag
gaggtgtttattggcgagcttcctctgatgactgagcgaggtacgttcattatcaatggt
gcagagagggttattgttaatcagattgtgcgcagcccaggggtatattttaaggatgaa
caggataagaatggacggcgaacatacaatgccagtgttatccctaaccgtggtgcctgg
ctaaagttcgaaacagataaaaacgaccttctgcatgtgcgtgttgataaaacacgcaaa
attaatgcccatgttttaatgcgggccatggggctatcagataacgatgtaatcgataag
cttcgtcaccccgagtattacaagaagtctattgaggctgcaaatgaggaaggaattagt
tcagaggatcaggctttgcttgagctttataaaaagcttcgtcctggtgagcctccttca
gtaagcggtggtcaacagcttctgcagacccgattttttgatcccaagcgttacgacctt
ggccgagttggccgttacaagattaataaaaagctgcgtctaacaatcccggatacggtg
cggaccctcacccatgaggatgtgctctcaacccttgattatctgatcaatttagaactc
gatgtgggtggtgccagccttgatgacattgatcacctgggcaatcgtcgagtgcgttca
gtgggtgaacttttgcagaaccaggtccgggttggtctcaatcgcctggagaggatcatt
aaagaacggatgacggtgggagagaccgattcgctcacgccagctcagttggtgaacccc
aagcctctcgttgcagctgttaaggagttcttcggttccagtcagctgagtcagttcatg
gatcagacgaatccattggctgagctcacccacaaacgtcgtatctcagctctggggcca
ggtggcctcactagggagcgtgctggcttcgcggtgcgtgatattcacccttcccattat
ggccgtctctgcccaattgagacaccggaaggcccgaatgcaggtttgatcaattcactg
gctacccacgctcgggtcaatcagtatggcttcattgagactcccttttggaaggttgag
aacggtcgcctgatcaaggagggagaccccatctatttatcagccgatcttgaggatgag
tgtcgtgtagctcctggtgatgtggccacggacgccgatggacagattctcgctgaatta
attccagtgcgttatcgccaggacttcgaaaaagttccacctgagcaagtggattatgtg
cagctctcgccggtgcaggtgatctctgtcgccacctccttgattcctttcctcgagcac
gatgacgccaatagggctctgatgggatcaaatatgcaacggcaggccgtaccactgttg
cggcctgagcggcctttggtggggacgggtctcgaaactcaggtggctcgtgattccggg
atggtgcccatctcccgcgtgaatggcatggtcacattcgtggatgccactgcgatcatc
gtccgggatgaggatggggttgatcacacccactacctgcagaagtatcagcgttcaaat
caggacacctgccttaatcagcgtccgattgtctgccagggtgatgcggtgatcgtgggt
caggttctcgcggatggttcggcttgtgaaggcggtgaaattgctctaggtcagaacgtt
ttggtcgcttatatgccttgggagggttacaactatgaggacgctattcttgtcagcgaa
cgactagttaaggacgacctctacacctcggtgcatatcgagaagtatgagatcgaggca
cgacagacaaagcttggccccgaagagatcaccagggagatacccaatgttgccgaggaa
agccttggcaatcttgatgaaatgggcatcattcgcatcggtgcttttgtcgagagtggc
gacattctggtgggcaaagtgacacctaaaggtgagtcagatcagcctccagaagagaag
cttttgcgtgccatttttggtgaaaaagcgcgcgatgtgcgtgataactctctacgcgtt
cccagcactgagcgaggacgagttgtggacgttcgtatttacactcgtgaacagggtgat
gagcttccccctggcgccaatatggtcgctcgagtgtatgtggctcagcgtcgcaagatc
caggttggcgacaagatggccggtcgccacggcaataaaggcatcatcagtcgcattctt
ccccgcgaagacatgccttttctgcccgatggcactccagttgacatcgttttgaatcct
ttgggcgtgcccagccggatgaatgtgggtcaggtgtttgagtgcttaatgggatgggca
gcagccaatctcgactgtcgggtcaaggtggtgccttttgatgaaatgtatggagctgaa
aagtcccagcagacagtggaggcttatctcaaggaagctgccaaacagccaggtaaggag
tgggtctacaaccctgacaatcctggcaagcttcaattgattgatgggcgttcgggtgaa
cctttcgaccagccggtgaccgttggctatgcacagattctgaagcttgttcatttggtt
gatgacaagatccatgctcgttcaacaggtccctattcactggtaacccagcaacctctt
ggcggtaaggctcaacaaggtggccaacgtttaggggagatggaggtgtgggctctggag
gcctatggcgccgcttacaccctgcaagagctgctgactgttaaatcagacgatatgcag
ggtcggaatgaagccctcaatgcaatcgtcaagggcaaacctatccccaggccggggaca
cccgagtctttcaaggtcttgatgcgtgagcttcagtctctagggctcgatatcgctgtt
tataccgatgaaggcaaagaagtggatctgatgcaggatgtgaatccccgccgtagtact
cctagtcgacccacttacgaatcccttggagtagcggattacgacgaagattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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