KEGG P.multocida: PM0411

Pasteurella multocida: PM0411

Entry

PM0411 CDS P.multocida

Gene name uvrD

Definition DNA-dependent helicase II

Orthology K03657 DNA helicase II / ATP-dependent DNA helicase PcrA
[EC:3.6.1.-]

Pathway pmu03420 Nucleotide excision repair
pmu03430 Mismatch repair

Class Genetic Information Processing; Replication and Repair; Nucleotide
excision repair [PATH:pmu03420]
Genetic Information Processing; Replication and Repair; Mismatch
repair [PATH:pmu03430]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: UvrD-helicase Viral_helicase1 PhoH
PROSITE: UVRD_HELICASE_ATP_BIND UVRD_HELICASE_CTER

Other DBs NCBI-GI: 15602276
NCBI-GeneID: 1243758
UniProt: Q9CNL7

Position 480549..482729

AA seq 726 aa
MDISALLDGLNDKQRDAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIAVEQVSEGSIMAV
TFTNKAAAEMRHRIESTLANHASQRLFGMWVGTFHSIAHRLLRAHHLDANLPQDFQILDA
DDQLRLVKRLLKLHNFDEKIFIPKQVCWYINNKKDDGLRAHQIDDNNDRHEREWIKIYQI
YQDTCDRAGLVDFAELLLRAYELWLKKPVILQRYQQRFQHILVDEFQDTNKIQYAWVKLL
AGEQGKVMIVGDDDQSIYGWRGAKIENIQRFLDDFSNAQTIRLEQNYRSTGNILASANQL
ISNNSNRLGKNLWTDGEKGEPVGIYAAFNELDEALFVSSQIKQWIENGGKLKDCAILYRS
NSQSRVIEEALIRSQLPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVVNTPPR
SIGERTLDMLRSVTREREVTLWQATQLAIHENLLTARAATALQRFLELINSLQQDTSEMP
LFAQTDFVIKHSGLYAMYQQEKGEKGEVRIENLEELVTATKEFIKPDEAEQLSDLTAFLT
HASLEAGEEQASPHQDYVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAKQKLTICYAESRRLYAKEERHLPSRFIAELPTECIQEIRLRGTVTRAMNQ
QKVGSVAPSLQESEWKMGQKVLHSKFGQGTIINVEGAENNTRLQIAFQNQGIKWLIAHLA
KLEKIR

NT seq 2181 nt +upstreamnt +downstreamnt
atggatatttcagcattattagatgggttaaatgataaacaacgtgatgcggttgccgcg
ccactcggcaattacttggtgttggcgggggccgggagtggtaaaacacgtgttttaaca
catcgtattgcttggttaattgcagtagaacaggtttctgaagggagtatcatggcagta
accttcaccaataaagccgcggctgaaatgcgtcatcgtatcgaaagcaccttagctaat
catgcttctcaacgtttatttggtatgtgggtgggcacgttccacagcattgcccaccgc
ttattgcgtgcccatcatcttgatgccaacttaccccaagatttccaaattctcgatgcg
gatgatcaactgcgtttagtgaagcgcctactcaaattacataattttgatgagaaaatt
tttattcctaagcaagtctgctggtatatcaataataaaaaagatgacgggttaagagcg
caccaaattgatgacaataatgatcgacatgagcgggaatggataaaaatttatcagatt
tatcaagatacttgtgatcgtgctggtttagtggattttgcggaattgttattacgtgct
tacgaattatggctgaaaaagcctgtgattttacagcgttatcaacaacgttttcagcac
attttggtcgatgagttccaagatactaataagatccaatatgcttgggtaaaattgctt
gcgggggaacaaggcaaggtgatgatcgtgggagatgatgatcaatcgatttatggttgg
cgcggggcaaaaattgaaaatatccaacgctttttagatgatttttccaatgcgcaaacc
atccgtcttgaacaaaattatcgttccacggggaatattttggcaagtgccaaccagctt
atttccaataacagcaatcgtcttggtaaaaatttgtggacggacggagaaaaaggtgag
ccagtaggaatctatgcggcttttaatgaattagatgaagccttatttgtttcctcacaa
attaaacaatggatagaaaatggcggtaagctaaaagattgtgccattttataccgcagt
aatagccaatcccgtgtgattgaagaggcgttaattcgttctcaattaccttatcgtatt
tatggcggcatgcgtttcttcgagcgtcaagagattaaagatgcccttgcttatttacgt
cttattgccaatcgtcaagacgacgccgcgtttgaacgggtggtcaatacgccacctcgt
agtattggtgaacgaacgttagatatgctgcgtagtgtgacccgcgaacgtgaagtgact
ttgtggcaagccacccaattagccattcatgaaaatttactgacggcgagagcagcaacc
gcactacaacgctttttagagttgattaattccttacagcaagataccagtgaaatgccc
ttatttgcgcaaaccgattttgtgattaagcattctggtttatatgccatgtatcaacag
gaaaagggggaaaagggcgaagtgcggatcgaaaacttagaagagttagtgactgccaca
aaagaatttattaagccagatgaggcagaacagttatctgatttaacggcctttttaact
catgcctccttagaagcaggggaggaacaagcctcaccgcatcaagactatgttgaaatg
atgacattgcactctgcaaagggattggaattccctcgggtatttatggtgggggttgaa
gaagggctatttccaagtttccgatcttttgaagaaccggggcgtttagaagaagagcgt
cgcttagcttatgttgggatcacgcgcgcaaaacaaaagttgacgatttgctatgcggaa
agtcgccgtttatatgccaaagaagaacgtcatcttccttcccgttttattgctgaatta
cctacggaatgtattcaagaaatccgcttacgtggtacggtgacacgtgccatgaatcag
cagaaagtcggatcggttgcaccgagtttacaggaaagtgaatggaaaatggggcaaaaa
gtgctacatagcaaatttgggcaaggtacgatcattaatgtggaaggggcggagaataat
actcgcttacaaattgcattccaaaatcaagggattaaatggctgattgcccatttagcc
aaattagaaaaaattcgttaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (3)   
   PROSITE (2)   
All databases (17)

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