KEGG   Prunus mume (Japanese apricot): 103323228
Entry
103323228         CDS       T03196                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
  KO
K10589  ubiquitin-protein ligase E3 C [EC:2.3.2.26]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103323228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103323228
Enzymes [BR:pmum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     103323228
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  HECT type E3
   103323228
SSDB
Motif
Pfam: HECT
Other DBs
NCBI-GeneID: 103323228
NCBI-ProteinID: XP_008223428
Position
LG2:33056561..33069074
AA seq 1035 aa
MFFSGDSSTRKRVDLGGRSTKERDRQKLLEQTRLERNRRLWLRQQNSAALKIQKCFRGRK
VAAAEHSKVREQFVGTYGKHCQNVDRFSFGPDSEFLRQLLFFFDARSVGDFSILVEMCRL
LQQFVRDTGDIVSLFAGMDYSSTHALVNYRVEQLAYLCVKAVHQNRNQLKDQLFAAPEVE
TVSTTLLLEAVVLLIDPKLPWACKTISYLLQRKAFTLYRDIILTGKESIKIRTSIGRVSS
LERSLAAVIPHIGQKPCTCPNIDPHWSFSSQILTIPFLWKLFPYLGEVFATQGMSQHYIR
QMALCVQNHAHVLPNDTSIELPGYACLLGNILESSGVALSQPGCSFEMAVDLAGVATFLL
EALPSIKSSNRESREEFMTGEDDMIVGDDVMEVVLNNDLERQICDAIDPRFLLQLTNVLF
GGISLASGSHHGPDDKEVSAVGAACAFLHVTFKTLPPERIMTVLAFRTELVPVLWNFMKR
CHENQKWLSLSEQLAYLLPGDAPGWLLPLAVFCPVYKYMLTIVDNEEFYEQEKPLSLKDI
RVLIIILRQALWQLLWVNPTAPTNPLKSFTNTVSNKKHPLEFIQHRVSIVASELLSQLQD
WNNRREFTSPGDFHADGVNEFFISQAAIENTRANDILKQAPFLVPFTSRVKIFTSQLAAA
RQRHGANSVIARNRFRIRRDRILEDAYNQMSALSEDDLRGPIRVTFVNEFGVEEAGIDGG
GIFKDFMENITRAAFDVQYGLFKETSDHLLYPNPGSGMIHEQHLQFFHFLGILLAKAMFE
GILVDIPFATFFLSKLKQKYNYLNDLPSLDQELYRHLIFLKHYKGDISELELYFVIVNNE
YGEQTEEELLPGGKNLRVTNENVITFIHLVANHRLNFQIRQQSSHFLRGFQQLIQKDWID
MFNEHELQLLISGSLDSLDVDDLRMHTNYVGGYHSDHYVIGMFWEVLKSFSLENQKKFLK
FVTGCSRGPLLGFKYLEPLFCIQRAGGNASEGALDRLPTAATCMNLLKLPPYRSKEQLET
KLMYAISADAGFDLS
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgttcttctcgggcgattcatcgactcggaagcgagttgatttggggggacggagtacc
aaggaaagggacaggcagaagcttctggagcaaacaaggctggagcgcaaccgccgctta
tggctacggcagcaaaactcggctgcacttaaaattcagaaatgcttcagagggagaaag
gtagcagcggctgaacattctaaggtacgagagcagttcgttggaacatatgggaaacat
tgccagaatgtggacaggtttagttttggtcctgattcagagtttctccgccagttactt
tttttctttgatgctcgaagtgttggtgatttttccatccttgtggagatgtgccggctg
cttcagcagtttgtcagagatacaggggatattgttagcctctttgcaggcatggattat
tcgtccacccatgctttggtaaattacagagtagagcaacttgcatatctgtgtgttaag
gctgttcatcaaaacagaaatcaattgaaggatcaactttttgcagcccccgaggtggaa
actgtgtcaacaactttactgttagaagcagtagttttattgatagatcccaagcttcca
tgggcttgtaagacaattagctatcttttgcaaagaaaggcttttaccctgtatagagat
attattttaacaggaaaggaaagtataaagatccgtacttccattggcagagtatcttcg
ttggaacgcagtcttgctgctgtaattcctcacattggtcagaagccgtgtacctgccca
aacatcgatccgcactggagcttttcatctcaaattcttacaattccttttctatggaag
ctattcccatacttaggagaggtttttgcaacacaggggatgagtcagcattacattcgt
cagatggcactctgtgtgcaaaatcatgctcatgtactccccaatgatacatcaattgag
ctacctggttatgcctgccttcttggaaatatattagaatcttctggagttgccttatct
cagcctggctgctcatttgaaatggctgtagaccttgctggtgttgcaacattcttgttg
gaggcccttccttcaattaaatcatcaaatagagaaagcagagaagagttcatgacgggc
gaggatgatatgattgtgggagatgatgtaatggaggtagttttgaataatgatttggaa
cgacagatatgtgatgccatagatccgcgctttcttctgcaattaacaaatgttttgttt
ggagggatttcacttgccagtggctcacaccacggaccggatgataaagaggtgtcagct
gttggtgcggcttgtgcttttctacatgttactttcaagaccttacctccagagagaatc
atgactgtactagcttttagaactgaacttgttccggtgctttggaattttatgaaacgg
tgccatgagaaccaaaaatggctgtcattgtctgagcagttggcatatctgctgccagga
gatgcacctggttggctattacctttggcagtattctgccctgtatacaagtacatgctt
acaatagttgataatgaggagttctatgagcaggagaagccattatcattgaaggatatc
agagtcctaattatcatactcagacaggccttatggcagcttctttgggtgaatcctacg
gctcccactaatcctctgaaatctttcaccaacactgtttctaacaagaagcaccctttg
gagttcattcaacacagggttagcattgtagcctctgaactcctatcccagttgcaagat
tggaacaatagacgagagttcacatcccccggtgactttcatgctgatggtgtcaacgag
ttctttatttcacaggccgcaatagaaaatacacgagcaaatgacattttgaagcaagct
cccttcctcgtaccattcacaagcagagttaaaatattcacttcacaattggcagcagct
agacaaagacatggggctaactctgtaattgccagaaaccgattcagaatccggcgggat
cggatcttggaagatgcttataatcaaatgagtgcattgtctgaagatgatcttcgagga
ccgattcgtgtaacgtttgtaaatgaatttggggttgaggaggctggaattgatggtggt
gggattttcaaagacttcatggagaacattactcgagcagcctttgatgtgcaatatgga
ctatttaaggaaacatccgatcatttactctacccgaatcctggttcgggaatgattcat
gaacaacatctccaattcttccactttctgggaatacttctagcaaaggccatgtttgag
ggaattcttgttgatataccgtttgcaacgttctttctgagcaaactaaaacaaaagtac
aactatttaaatgatttgccttcattggaccaagaattgtaccgccaccttattttcttg
aagcattataaaggtgatatatcggaattagaactgtactttgtcatcgtaaacaatgaa
tatggagagcaaacagaagaagagctgcttcccgggggaaagaacctacgtgttactaat
gagaatgtcattacctttattcatcttgttgccaatcaccgtttgaattttcagatacgc
caacaaagttctcatttcttaagggggtttcagcagcttatacagaaagattggattgat
atgtttaatgagcatgaacttcagcttctgatatcaggttcacttgacagcttggatgtt
gacgatctacggatgcacaccaactatgtgggtggctatcatagtgatcactatgtcatt
gggatgttctgggaagttctgaaaagcttttcattggaaaatcagaagaaatttctaaag
tttgtgaccgggtgctcccgaggacctctgcttggattcaaatacttggaaccattattt
tgcatacagagggctggtggtaatgcatctgaaggagctcttgaccgattgccaactgca
gccacttgtatgaatctcctaaagcttccaccatataggagtaaagagcaactggaaacc
aaattgatgtatgctataagtgcagatgctggctttgatttgagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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