KEGG   Prunus mume (Japanese apricot): 103326753
Entry
103326753         CDS       T03196                                 
Name
(RefSeq) nuclear cap-binding protein subunit 1
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03013  Nucleocytoplasmic transport
pmum03015  mRNA surveillance pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103326753
  09122 Translation
   03013 Nucleocytoplasmic transport
    103326753
   03015 mRNA surveillance pathway
    103326753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103326753
   03041 Spliceosome [BR:pmum03041]
    103326753
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     103326753
Spliceosome [BR:pmum03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    103326753
SSDB
Motif
Pfam: MIF4G_like MIF4G_like_2 MIF4G CNOT11
Other DBs
NCBI-GeneID: 103326753
NCBI-ProteinID: XP_008227217
Position
LG3:17016509..17033170
AA seq 865 aa
MSSWKSLLLRIGEKSPDYGTSSDPKEHIETCFGVLRRELEHSPNEVSQFLLQCAEQLPHK
TSLYGTVIGLLNLENEEFVRKVVENTQSNFQDALDSGNCNRIRLLMRFLTVMMCSKVIHP
SSLVVVFETLLSSAATTVDEEKGNPSWQSRADFYVTCILSCLPWGGAELIEQVPEEIERV
MVGVEAYLSIRKRVSDTGLSAFEDDDENVREPNDKDFLEDLWGRIQVLSSNGWKLDSVPR
PHLSFEAQLVAGKSHEFGPISCPDQPDPPSTISSITCGKQKHDAELMYPQRIRRLNIFPA
SKTEDLQPMDRFIVEEYLLDVLFFLNGCRKECASYMAGLPVPFRYEYLMAETIFSQLLML
PQPPFRPTYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPK
GAPNFKFSVEETSEGNGQHALSVDLRTMVKGRASAREMIVWIEESVFPVHGMEGTLNVVV
QTLLDIGSKSFTHLITVLERYGQVIAKLCGDQDKQVMLITEIDSYWRNNSQMSAVAIDRM
MGYRLLSNLAIVRWVFSPANIEQFHLSDRPWEILRNTVSKTYNRVCDLRKEILSLKKSIV
SAEEAAATAKAELVAAESVLSLMDGEPVLGENPVRLKRLKSYAEKAKEEELSVRESLEAK
EALLARALDEFEALFLSLYKNFLNVLTERLPSASKCVTLQGLKSIHADSMAVDIEESSAM
EVDDENGRPKKSQLNGGRMSSVYNVGEKEQWCLSTLGYLKAFSRQYASEIWPHMEKLDAE
VLTEDVHPLIRKAVYCGLRRPVDGL
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgagcagttggaagagtcttcttcttcgaattggcgagaaatctcccgactatggcacc
tcctccgaccccaaagaacacattgaaacttgctttggcgtgcttcgtcgagaactggag
cactctcccaacgaagtttcgcaattccttctccagtgtgccgaacaattacctcacaaa
acttctctttatgggacagtgattggcttgttaaacttggagaatgaggaatttgttagg
aaagtagtggagaacactcaaagtaattttcaggatgccttagattctggaaattgcaac
aggattcgtcttttgatgaggttcctgactgttatgatgtgcagtaaagttatccatccc
agttctctggtggttgtctttgagacattattatcatcagctgcaacaacagttgatgag
gagaaagggaatccctcctggcaatcgagagctgacttttatgtaacatgtattttatca
tgtctcccttggggaggagcagaactcattgagcaagtccctgaggaaattgagagagtt
atggtcggtgttgaagcttatttgagcataagaaagcgtgtttctgacaccgggttgtct
gcttttgaggatgatgatgagaacgtgagagaacctaatgataaggatttcttggaagat
ttgtggggccgaatacaagttttatctagcaatggatggaaacttgatagtgttccgaga
cctcacctttcatttgaagcacagctagttgctggaaagtctcatgagtttggacccatc
agctgtcctgaccaacctgatccgccttcaacaatttctagtataacgtgtggtaaacaa
aagcatgatgcagagttaatgtatcctcaaaggatacgaaggctgaatatatttcctgca
agtaaaactgaggacctgcaacccatggatcgcttcattgtggaagagtatctgctagat
gtccttttttttttaaatggctgtcgaaaggaatgcgcttcatacatggctggcctacct
gtaccctttcgatacgagtatcttatggcagagacaattttctctcagttactcatgcta
ccgcaaccccctttcaggccaacatattacacactagttattatcgacctctgtaaggct
cttcctggagcctttcctgcagtagttgctggtgctgtacgagctcttttcgagaaaata
gctgatttagatatggaatgtcgaacgcggctcatcctttggttttcacaccacttgtca
aactttcagttcatctggccatgggaagagtgggcctatgtcttagacctgccaaaatgg
gccccacaacgtgtatttgttcaggaggttctggagagagaagttcgtttatcctactgg
gacaaagtgaagcagagcattgagaatgcccctggcttagaagagttgcttcctcccaag
ggggcaccaaatttcaaattcagtgttgaagaaaccagtgaaggaaatggacaacatgca
ctttctgtcgacctcagaaccatggtaaaagggagggcatctgcccgtgaaatgatcgta
tggatagaggaaagtgtgtttcctgttcatgggatggaaggtaccctcaatgtggttgtg
caaactcttctcgacattggatctaaaagtttcactcatttgattaccgtattggagaga
tatggtcaagtcattgcaaaactatgtggtgaccaggataagcaggtcatgctgataact
gagattgattcttattggaggaacaattctcaaatgagtgctgttgcaatagataggatg
atgggctaccgacttttatctaatctggccattgtcagatgggtcttttctccagcaaac
attgagcagtttcatctatcagatcgtccatgggagattttaagaaacacagttagcaag
acatataaccgtgtatgtgatctaaggaaggagattttgtctctgaaaaagagtattgta
tcagctgaagaagctgcagcaacggcaaaagcagagttagtggctgctgaatcagtgctt
tcacttatggatggtgaacctgttcttggggaaaatcccgtgaggctgaagcgcttgaaa
tcgtatgctgaaaaggcaaaggaggaggagttgtctgtacgtgaatctttagaggctaag
gaggctcttctagctcgagcccttgatgaatttgaggcattgttcctctccttgtacaaa
aatttcctgaatgtgttgacagaacgcctgccaagtgcatccaaatgtgttacattgcag
ggattgaagtcaattcatgcagattctatggcagtcgacattgaagaatcgtcggcaatg
gaggtagacgatgagaatggaagacctaagaaaagccaattgaatggtgggaggatgagt
agtgtatataatgtaggtgaaaaagagcagtggtgtctatcgactttaggctacctgaag
gccttctcgaggcaatatgcttctgagatttggcctcacatggagaagttggacgcggag
gttctaacagaagatgtgcatcctcttattcggaaagcggtttattgtggccttcgtcga
ccagttgatgggttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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