KEGG   Prunus mume (Japanese apricot): 103328884
Entry
103328884         CDS       T03196                                 
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103328884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103328884
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     103328884
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII
Other DBs
NCBI-GeneID: 103328884
NCBI-ProteinID: XP_008229511
Position
LG4:14911360..14916542
AA seq 1200 aa
MDYNAPVAKRTRLSEEKYWRELWEKKAGKRELRDGSDKKGKSRKGSNVRDCVSVDDYEEA
TVSPSRGGKDKKKGGKRKSAEGSKKQRSGCDDSDEGDDPSVEIISESSFGKQDNDSVGFD
SVESAGSNGKKSNSGAVDMENFFPVEVEDSDDGVVYLGEEKVGGFGCLSSERSDACEDAA
SDGTTEDAASDGSDESWKSSSSEDSISHASDESDDEAFEPENSESSVFSKSLNSCGEEGH
DDEREVTKRSGKPRKRKTVEGDVEVKKGQDIDASEIAKGSGKAEKGKSVEIGVRRKRRVG
LDMSVGADDDFDSNKDDPIHSAQEKRRSEKKRRKCGTVNDNEDSSSGHDNDNEDVDDANC
SCPRTRRHKKKTGSDDDRRNDECDKTYGGSPETERSKWNDVHGVCKKNKRDIGNLTNRRS
MRAKKDCNVLKILVDSIYEKGEGTLKGSISFGDEGRKDERNPPESTLPLKFSFGEQSTVP
KKSECDPEEKELWDDLEFALRASEIDSSDSNVVESQDSLPIADEVETVASLCRRGVHQLI
LDEEIGLRCKFCSYLDQEIKYILPDFLDCPYGRFGTRGSETDNRSIFDELQSHASDSDRH
SGYNSHPHVDGTVWDLIPGVKSSMYPHQREGFEFIWKHIAGGIHLDKLKKPSSVVGGNGC
IISHAPGTGKTRLTIVFLQTYMKLFPECRPLLIAPRSMLLTWEEEFKKWKLEFPFHNLNN
WELSGKENQTAVNYVMQAQGRKSVNIESGRMLKLYSWRKKRSILGISYRLFEQLSGAQKT
GSVDEMGKILLEFPGLVVFDEGHTPRNDQSHMWKALSEIKTKRRILLSGTPFQNNFQELF
NTICLVRPAFAASIESTKFSRDLPRKRGRKSNAEKWKWTSLASSSGKVVDDKEKHATEVK
AQIAPFVHVYKGSVLQDSLPGLRNSVVVLHPTQLQERFHKRIQVVKELFRYENLEALISF
HPSLLLKEDAFSADQGRLQELKLNPDAGVKAKFVMELIRLSDALKEKVLVFSQYIDPLNL
TRDLLKSQFQWTEGEEVLYMDGKSDMKQRQSSMKVFNDPSSKAKVLLASTKACSEGISLV
GASRVVLLDVTWNPSVERQAISRAYRLGQKKVVFVYHLLMDRTNEEHKYSRQVDKSRLSE
LVFSDSDKKKVLEKEIRATVSEDKILQEMAQHGKLKHLFKSIALLHEDIYFEQLGLSTFG
NT seq 3603 nt   +upstreamnt  +downstreamnt
atggactataacgcgcctgtagcgaagaggacacggctaagtgaagagaaatactggagg
gagttatgggagaaaaaggctgggaaacgagaactccgtgatgggtctgataagaaaggg
aaatcacgtaaggggtccaatgtacgggattgtgtatctgtggatgactatgaggaagcc
actgtgagtccatccaggggaggcaaggacaagaaaaagggtgggaaaagaaaatctgct
gaggggtctaagaaacagaggtctggttgtgatgattctgatgagggtgacgatcccagt
gttgaaatcatcagtgaaagttcatttggaaagcaagacaatgattctgtgggttttgat
agtgttgagagtgcaggatcaaatggaaagaagtctaactctggtgctgtggacatggag
aatttttttccagttgaagtggaggatagtgatgatggggtggtgtatttgggtgaagag
aaagtaggaggttttggttgtttgagttcagagaggagtgatgcctgtgaggatgctgct
tctgatggcaccactgaggatgctgcttctgatggctcagatgaatcttggaagagtagt
tccagtgaggattctatttctcatgcctcagatgaatcagatgatgaggcttttgaacca
gaaaactcagaaagttctgtattttctaagtcgttgaattcatgcggtgaagaggggcat
gatgatgaaagagaggttaccaagagaagtgggaaaccaagaaagaggaaaactgttgag
ggtgatgttgaggtgaagaaggggcaggacattgatgctagtgagattgcaaaaggaagt
gggaaagcagaaaaggggaaaagtgttgagattggtgtgaggagaaagagaagggttggg
ttggatatgtcagttggtgcagatgatgactttgatagcaacaaagatgatcctattcat
tctgctcaagagaagagaagaagtgaaaagaagagaagaaaatgtggaactgtaaatgat
aatgaggattcttcttctgggcatgataatgacaatgaagatgttgatgacgccaattgc
agttgtccgagaactaggcgccacaaaaagaaaacagggtctgatgatgatagaagaaat
gatgaatgtgacaagacctatggtggtagtccagaaactgagcgtagtaaatggaacgat
gtccacggagtgtgcaagaagaataaaagggatatcgggaatcttactaacagaaggtcc
atgcgggcaaagaaggattgcaatgttttaaagattcttgtagattccatttatgaaaag
ggagaagggacactgaaagggtcaatttcctttggagatgaaggccgtaaagatgaaaga
aatccaccagaatctactcttccacttaagttcagttttggagagcagtcaactgtacca
aagaagtcagagtgtgatccagaagaaaaagaactatgggacgaccttgaatttgctctc
agagcttctgagattgattcctctgattctaatgtggttgaaagtcaagattcactccct
attgctgatgaagttgaaacagtagctagcctctgtaggcgaggggttcatcagcttata
cttgatgaagagattggactcagatgcaagttttgctcttatttagatcaggagatcaag
tatattttaccagacttccttgactgcccttatggaagatttggcacaaggggctctgaa
acagacaaccggtctatctttgatgagcttcaatctcatgcttctgattctgatcgccat
tctggctataattctcatcctcatgttgatggcacagtgtgggacttaattcctggtgtt
aaaagtagtatgtatccccatcagcgtgaaggttttgagtttatctggaagcatatagcg
ggtggcattcatcttgacaagttgaaaaagccaagcagtgttgttggtggcaatggatgc
atcatatcacatgctcctggaacaggcaaaactcgcctgaccattgtctttctccagaca
tacatgaagttattcccagaatgcaggccgcttttgattgctcctcgtagcatgctcctt
acgtgggaagaggagtttaaaaaatggaagcttgaatttccgtttcacaatcttaacaac
tgggagttatctggcaaagaaaatcaaacagctgtaaattatgtgatgcaagctcaaggc
aggaaaagtgtcaacatagaaagcggacgaatgctgaagttgtattcctggagaaagaag
agaagcatcctggggattagttaccggctgtttgagcagctttctggagcacagaaaact
ggctcagttgacgaaatggggaaaatccttctcgagtttcctggtcttgtagtgtttgat
gaaggacacactcctcggaatgatcaaagtcatatgtggaaggctttgtcagaaatcaaa
acaaaaaggcgcattcttctctctggaactccgtttcagaataattttcaggagctcttc
aatacaatctgcctcgtgaggccagcttttgcagcctcgattgagtctactaaattcagt
agagatcttcccagaaaacgaggccggaaaagcaatgcagagaaatggaaatggacttct
ctggccagcagtagtggaaaagttgttgatgacaaagaaaaacatgctacagaggtcaaa
gctcagattgcaccgtttgtccacgtctataaaggttctgtgctgcaagacagtcttccc
gggttaaggaactcagttgttgttctacacccaacccagctacaggagaggtttcataag
agaattcaagtggtgaaggaactgtttcgatatgaaaacctagaggctttaatatctttt
catccttccctcttgcttaaggaagatgcattttctgctgaccagggtaggttacaagag
cttaaattaaatcctgatgctggagtgaaggcaaaatttgtgatggaactcatcaggctc
agtgatgctttgaaagaaaaggttcttgttttcagtcagtacattgatcccttaaacctt
acaagggatcttctgaaatctcaatttcagtggactgaaggggaagaggtgctgtatatg
gatggaaaaagtgatatgaagcagcgtcaatcctcaatgaaggttttcaatgacccatct
agcaaagccaaggtattactagcttcaactaaagcatgttctgaaggcataagccttgtt
ggagcttccagggttgtgttgctggatgtcacatggaatccatctgtggagaggcaagca
atatcccgtgcctacaggctgggacagaagaaggttgtgtttgtctaccatctcctcatg
gacagaactaacgaggagcataaatacagtcgccaagttgacaagagtcgtttgtctgag
ttggtgttttctgattcagacaagaagaaggttcttgagaaggaaatccgagccacggtt
tctgaggataaaatcttgcaagagatggctcagcacgggaaactgaagcacctatttaaa
agcatagctttactgcatgaagacatatactttgagcagctaggcctgtcaacttttggt
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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