KEGG   Prunus mume (Japanese apricot): 103333573
Entry
103333573         CDS       T03196                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103333573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103333573
Spliceosome [BR:pmum03041]
 Common components
  Common spliceosomal components
   SR proteins
    103333573
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer RRM_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 103333573
NCBI-ProteinID: XP_008234650
Position
LG5:complement(25136576..25141786)
AA seq 258 aa
MSGRFSRTIYVGNLPSDIRESEVEELFYKYGRIVDIELKIPPRPPCYSFVEFESSRDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGGYDRGSSGGGSGGGRFGASRHSEYRVI
VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNSDDMKYAIRKLDDTEFK
NPWTRSYIRVKLYESSPSRSRSRSRSRSRSVRRNRSKSRERSVSRSVSRSRSASPVKSSR
PRSRSGSESPRPVRSGSG
NT seq 777 nt   +upstreamnt  +downstreamnt
atgagtggtcgattttctcgcacaatctacgttggcaacctaccctcagatataagagaa
tcagaggttgaagaattgttctataagtatggccgcattgtggatattgaattgaagatt
ccacctcgccctccgtgttattcgtttgttgagtttgagagttctcgtgatgcagaagat
gcaatcagagggcgtgatgggtataactttgacggttgccgtttaagggtggagcttgcc
catggtggtaggggcccatcttcaagcgatcgtcgtggtggatatgacagaggcagcagt
ggtggaggtagcggtggcggtcgctttggtgcttcacgtcattctgaatatagggttatt
gttcgtggcctcccttcttctgcttcatggcaagacttgaaggaccatatgcgaaaagct
ggtgatgtgtgttttgctgaggtttctcgtgacagcgaagggacttatggtctagttgat
tataccaattctgatgacatgaaatatgctattcggaaacttgatgatacagaatttaaa
aatccttggacaagatcttatattcgggttaaattgtacgagagcagtccgtcaaggagc
cggagtagaagtcgtagcagaagcagaagtgtgagaaggaatcggagtaagtctcgggag
cgatccgtctcaagatcagtatcaagatctaggtctgcatcacctgtcaaatcctccagg
ccaagatcaaggtcagggtcagaatctccccgtccggtgcggtcgggtagcggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system