KEGG   Prunus mume (Japanese apricot): 103338169
Entry
103338169         CDS       T03196                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103338169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmum03041]
    103338169
   03009 Ribosome biogenesis [BR:pmum03009]
    103338169
Enzymes [BR:pmum01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     103338169
Spliceosome [BR:pmum03041]
 Complex A
  U1 snRNP components
   U1 related factors
    103338169
 Complex B
    103338169
Ribosome biogenesis [BR:pmum03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    103338169
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 103338169
NCBI-ProteinID: XP_008239580
Position
LG7:complement(11814139..11818678)
AA seq 609 aa
MYAYDNRYTDVNSYRERRSDLMGPAPAVAPPAGPAYGRGGGGGFSGCPPFQPPSGRFNIG
RGGGNGSFGGRASNGHIGGGRGRGGGGRFGGGRDFDGGRGGGGRSSGFSRGGSGGRGFGG
RGGGRHGGSSGGDLDNIVLPKQDFRSLVPFEKNFYVESSSVRAMSEQEVMVYRNRREITV
EGHDIPKPIQMFEDANFPDYCLDAIAKLGFVEPTPIQAQGWPMALKGRDLVGIAETGSGK
TLSYLLPALVHISAQPRLVPGEGPIVLVLAPTRELAVQIQEESSKFGSRSNIRSTCIYGG
APKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRK
IVSQTRPDRQTLYWSATWPREVETLARQFLRNPYKVIIGSASLKANQSIKQVVEVVSDGE
KYNRLIKLLKEAIVGSRILIFVETKKGCDQVTKQLRMDGWPALSIHGDKNQAERDWVLAE
FKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGATGTALTFFT
HANAKFARELIKILQEAGQVVSPALAAMSRSSGSFGGSGGNFRNRGRGGGFGNRISGSNT
VPIGYKRPW
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgtacgcctacgacaacagatacaccgacgtcaactcctaccgtgagcgccgaagtgac
ctaatgggtccagcgcctgcggtggctccgccagcgggccccgcctatggccgtggcggt
ggggggggctttagtggctgcccgccgttccagcccccttcgggtcggttcaatattggg
cgaggtggtggtaatgggagttttggtggcagagcctccaatggtcatattggtggtggg
aggggccgtggcggtggtggtaggtttggtggtggtagggattttgatggaggccgtggc
ggtggcggtaggagctctggttttagccgcggtggaagcggtgggcgtggatttggtgga
agaggaggaggtagacatggtgggtcatcaggaggagacttggataacattgtgcttccc
aagcaagattttaggagcttggtaccttttgagaagaatttctatgttgagagctcttcg
gtgagggcaatgtcagagcaggaggttatggtgtatcgcaacaggcgggagattaccgtc
gaagggcatgatatcccaaagccgattcagatgtttgaggatgcgaatttccctgattac
tgccttgatgctattgcaaaattgggttttgttgaaccaacaccaattcaggctcaagga
tggccaatggcattaaagggtagagatttagttggaattgccgagactggttctggtaag
actttgtcctatctgctcccagctttggtgcatattagcgcacagcctcggttagtgcca
ggtgaaggtcctattgtgctagtattagcacctactcgagaattggcagttcaaattcaa
gaagaatcttcaaaatttggctcacgttctaatattaggagtacttgcatttatggtggt
gctccaaaaggaccccagatacgggatcttaaaagaggggttgagattgtcatagctaca
cctggccgactgatagatatgttggaagcacagcacacaaatttgcgaagagtgacctac
ctagttttggatgaggctgacaggatgttggacatggggtttgagcctcagataaggaaa
attgtatcacaaacccgaccagatcggcagacattgtattggagtgccacatggccaagg
gaggttgaaactttagcaaggcagtttttacgtaacccatataaggtaatcattggatca
gcaagtcttaaagcaaatcaatctataaaacaagttgttgaagttgtgtcagatggggag
aaatataataggctgatcaaactgctcaaagaagcaattgttgggagccgaattttgata
tttgtcgagacaaaaaagggatgtgaccaagttactaagcaattgaggatggatggatgg
ccagctctatccattcacggtgataaaaaccaggccgaaagggactgggtcttggctgag
tttaaaagtggaaggaatcctataatgactgccactgatgtggctgcgcggggtcttgat
gtgaaggacataaaatgtgtgatcaattatgattttccatcaagcctagaggattatgtc
cacagaattggacgaaccggtcgtgcaggggcaacaggaactgctttaacctttttcaca
cacgcgaatgcgaaatttgctagggaactaatcaagatcctgcaagaagcaggtcaggtg
gttagccccgcattggctgcaatgtcgcggtcaagtggtagttttggaggctctggaggg
aacttccgcaatagagggcgaggaggaggatttgggaatcggatttcgggttcaaatact
gttcctattggttacaagaggccatggtag

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