KEGG   Prunus mume (Japanese apricot): 103341272
Entry
103341272         CDS       T03196                                 
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5 isoform X1
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    103341272
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pmum04040]
    103341272
Ion channels [BR:pmum04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   103341272
SSDB
Motif
Pfam: Ion_trans cNMP_binding Ion_trans_2 IQ
Other DBs
NCBI-GeneID: 103341272
NCBI-ProteinID: XP_008242993
Position
LG8:complement(16792856..16798402)
AA seq 731 aa
MFDCSYKSQYLGGQREKFVRLDDLDSRLSSPSDSGARRCGFNIEGLSRTGPARDTSFKRG
MRKGSEGLKSIGRSLGFGISRAVFPEDLKGSDKKIFDPQDKFLLLWNRLFVISCILAVSV
DPLFFYLPVINNSSCLGIDRRLAIIATTLRMIVDAFYLIHMALQFRTAYIAPSSRVFGRG
ELVIDPARIAKRYLRSYFIIDFLAVLPLPQIIVWRFLQRSKGSDVLATKQALLFIVLLQY
IPRLVRVLPLTSELKRTAGVFAETAWAGAACYLLLYMLASHIVGAFWYLLALERNDTCWQ
KACTHFGKLCDKNFLYCGNQNILDTGTWSNVTGNIQSKCSPDDQNTYFDFGIYKSALSSG
VVSSKKFLPKYCYCLWWGLQNLSTLGQGLATSTYPGEVIFSISLAIFGLILFALLIGNMQ
TYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEQSLVQSL
PKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPSLFTESTYIVREGDPVDEML
FIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTVRALTE
VEAFALVAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKNMEL
RRKEEEGETEVFGGVRSNAGGSYSIGATFLASRFAANALRGVHRNRTAKSARELVKLQKP
PEPDFSAESAD
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgtttgattgcagttacaagtcacagtacttgggagggcagagagagaagtttgtcagg
ctcgatgacttggactctaggttatcatcaccttctgatagtggggcaagaagatgtgga
tttaatattgagggactaagccgaactggtcctgcaagggatacatcttttaagagagga
atgagaaagggatctgaaggacttaagtcgatcggtcgatcacttggatttgggatttct
cgtgcagtgttccctgaagatcttaaagggtcagacaagaagatatttgatcctcaggac
aaatttctcctgttgtggaatagacttttcgtcatatcatgtattctggcagtgtctgtg
gaccctttgtttttctatcttccagtcatcaataattcaagttgtcttggtatagataga
aggttggctatcattgcgaccacattgcggatgattgttgatgctttctatcttattcac
atggctctccagtttaggacagcttacattgctccatcatctcgggtttttggacgaggt
gaactggtgattgatccggcacgaatagccaagcgatacttacggagttatttcattatt
gattttcttgctgtgctacccctaccacagattatagtttggaggtttcttcagaggtcc
aaaggttcagatgtgcttgctacaaaacaggctttgcttttcatagttttgcttcagtat
attcccagacttgttcgagtcctacctttgacttcagaactgaaaagaacagctggcgtc
tttgctgaaactgcttgggcaggtgctgcatgttacctgctattatacatgctcgctagt
catatagttggggcgttttggtatttattagctttagaacgtaatgatacatgctggcag
aaggcttgtactcattttggaaaactatgtgataaaaatttcttgtactgcgggaaccaa
aacatattggatactgggacttggtccaatgttactggaaacatccagtcaaaatgctca
ccagatgaccagaatacctactttgattttggaatctacaaatcagctttatcatctggt
gttgtttcatccaagaagttcctccccaaatactgttactgcttatggtggggactacag
aatttaagtacacttggccaggggcttgcaaccagtacctatcctggagaggttatattt
tccatatcactagctatatttggactgatcctctttgcacttctgataggaaacatgcag
acctaccttcaatctcttactattcgacttgaggagatgagggtcaaaagacgcgattca
gagcagtggatgcatcaccgcttgctcccacaagacctaagggaacgtgttaggcgatat
gatcaatataagtggttggaaacacgtggggtggacgagcagagtttggttcagagtcta
ccaaaggatcttaggagagatattaaacggcacctctgtttggcgttagtgaggagggtt
cctctgtttgagaatatggatgagagattgcttgatgctatttgtgagagactgaaacca
agtttattcacagagagtacttacatagttcgagaaggagatccagttgatgagatgctt
ttcatcattcgtggtcgcctggagagtgtaacaacagatgggggtaggagtgggtttttt
aaccgcagtctactgaaagaaggtgatttctgtggggaggaacttctgacttgggcgctg
gatccaaaatctggttctaacctaccgtcatctactaggacggtaagggctttgacagag
gttgaggcttttgcccttgtggctgaagagttgaaatttgttgccagtcagtttaggcgc
cttcacagtaggcaggttcagcacaccttccgtttctactcgcagcagtggcggacatgg
gctgcttgctttattcaagcagcatggcgtcgttattccaagaggaaaaacatggagctt
cgccggaaggaagaggaaggagaaacagaagtgtttggaggtgtacgaagcaatgcggga
ggttcatatagcattggtgccacgtttttagcttccaggtttgctgccaatgcacttcgt
ggtgttcaccgaaataggactgcaaagagtgctcgagaattggtcaaattacaaaagcct
ccagaacctgattttagtgctgaaagtgctgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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