KEGG   Pasteurella multocida subsp. multocida HN06: PMCN06_1451
Entry
PMCN06_1451       CDS       T01776                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
pmv  Pasteurella multocida subsp. multocida HN06
Pathway
pmv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PMCN06_1451 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmv03021]
    PMCN06_1451 (rho)
   03019 Messenger RNA biogenesis [BR:pmv03019]
    PMCN06_1451 (rho)
Transcription machinery [BR:pmv03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PMCN06_1451 (rho)
Messenger RNA biogenesis [BR:pmv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PMCN06_1451 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA AAA_22 AAA_25
Other DBs
NCBI-ProteinID: AFF24681
Position
1536066..1537265
AA seq 399 aa
MGLENLARLRKQDIVFAILKQHAKSGEDIFGGGVLEILPDGFGFLRSADSSYLAGPDDIY
VSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDQVNDDRPEVSRSKILFENLTPLH
ANSRLRMERGNGSTEDLTARILDLASPIGKGQRGLIVAPPKAGKTMLLQNIAQSITYNYP
ECELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRHVQVAEMVIEKAKRSVEHKKDV
VILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKRFFGAARNVEEGGSLTIIATAL
VDTGSKMDEVIFEEFKGTGNMELHLSRKIAEKRVFPAIDFNRSGTRKEDLLTSPDELQKM
WILRKILHPMGEVEAMEFLIDKLMVAKTNDEFFEMMKRS
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgggcttagaaaatctagctcgcctacgcaaacaagacattgtcttcgcaatcttaaaa
caacacgctaaaagcggtgaggacatctttggtggtggtgtgttagaaattctacccgat
ggtttcggtttcttacgctccgctgacagttcctaccttgccggccctgatgatatctat
gtttcaccaagtcaaatccgtcgtttcaacttacaaacaggtgataaaattgaaggtaaa
attcgtccacctaaagaaggtgaacgttattttgcgttattaaaagtcgatcaagtcaat
gacgaccgacctgaagtgtcccgtagcaagattttattcgaaaacttaacccctttacat
gcgaactctcgtctcagaatggagcgaggtaacggctcaacggaagatttaactgcccgc
attttggatttagcttccccgattggtaaaggacaacgtggtttgattgtggcaccaccc
aaagccggtaaaaccatgttgttacaaaacatcgcacaaagcattacttacaattaccct
gaatgtgaattgatcgtgttattaattgacgaacgtccagaagaagtgactgaaatgcaa
cgttcggttaaaggtgaagtgattgcttcgacctttgatgaacccgcaactcgccacgta
caagtcgctgaaatggtgattgagaaagcaaaacgttctgttgagcataaaaaagacgtg
gtgatcctccttgactcaattacacgtttggcacgtgcttataacaccgtcactccggca
tcaggcaaaattctttctggtggtgtggatgctaatgcgttacaccgtccaaaacgtttc
ttcggtgcggcacgtaatgttgaagaaggtggtagcttaaccattatcgccacagcactc
gtagatacgggctcaaaaatggacgaagttatctttgaagagttcaaaggaaccggtaat
atggaattgcatctttcgcgcaaaattgccgaaaaacgcgttttcccagccattgacttc
aaccgttcaggcacccgtaaagaagatttactcacaagcccagatgaactacaaaaaatg
tggatcctacgtaaaattttacatccaatgggcgaagtggaagcgatggagttcctcatt
gataaactcatggtcgccaaaaccaacgatgagttttttgaaatgatgaaacgttcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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