KEGG   Paenibacillus mucilaginosus K02: B2K_25615Help
Entry
B2K_25615         CDS       T02041                                 
Definition
DNA polymerase LigD, polymerase domain-containing protein
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
pmw  Paenibacillus mucilaginosus K02
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:pmw03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pmw03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pmw03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:pmw03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(6062390..6063295)
Genome map
AA seq 301 aa AA seqDB search
MTDERGIVQVDGVEVEISRPDKLLWPEPGITKLIYLQKLAALSPYLLPYCRDRHLTTRRF
PHGVQGKFFYQKNAPGGRPDYVKTHLYEGVEYVNLDSLPVLLWLGNLAALEFHPSFETVH
GEEPQEWVIDVDPEREGDPRLMEAAARVGEALEGMGLRSVPKTSGASGVQVVVPLTEGHT
FEDLHRVGGFLARFLAEKFRTLFTVERLLKEREGRIYLDYVQVAAGKSMAAPYTPRATPE
ATVSTPLTWDEVKTGVSPKAFHLLSIEKRLAEKGDLLAQAERQSLAPILKFLEKRPAALG
R
NT seq 906 nt NT seq  +upstreamnt  +downstreamnt
atgacggacgaacgcggcatcgttcaagtggacggtgtggaagtggagatctcccgtccg
gacaagctgctgtggccggagcccggcatcacgaagctgatttacctgcagaagctggcg
gccctgtcgccttatctgctgccgtactgccgggaccggcatctgacaacacggcggttc
ccgcatggggtgcagggcaagttcttctaccagaagaacgctcccggcggcaggcccgat
tatgtgaagacccatctctatgaaggggtggagtatgtcaacctcgattcgctgccggtg
ctgctgtggctcggcaacctggcggcgctggagttccatccgtccttcgagacggtgcat
ggcgaggagccgcaggagtgggtcatcgacgtggatcccgagcgggagggcgacccccgt
ctcatggaggcggccgcccgggtcggagaggcgctggaggggatgggcctgcgttcggtc
cccaagacctccggagcctcgggcgttcaagtcgtggttccgctgacggagggacatacc
ttcgaggatctgcaccgggtcggcgggtttctcgcccgctttctggccgagaaattccgt
actctgttcacggtggagcggctgctgaaggagcgggaagggcggatctacctcgactac
gtgcaggtggcggcgggcaaaagcatggcggcaccctatacgcccagggcgacgccggaa
gccacggtatcaacgcccctgacgtgggacgaagtgaagacgggcgtctccccgaaggcg
ttccatctgctctcgatcgagaagcggctggccgagaagggcgacctgctcgcacaggcg
gagcggcagtcgctggcgccgattctgaagtttctggagaagcgcccggctgccttgggg
agatag
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