KEGG   Pseudomonas mendocina ymp: Pmen_0003
Entry
Pmen_0003         CDS       T00510                                 
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
pmy  Pseudomonas mendocina ymp
Pathway
pmy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Pmen_0003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmy03400]
    Pmen_0003
DNA repair and recombination proteins [BR:pmy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Pmen_0003
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_21 AAA_16 AAA_15 AAA_29 AAA_27 ABC_tran AAA_13
Other DBs
NCBI-ProteinID: ABP82778
UniProt: A4XN62
Position
2712..3815
AA seq 367 aa
MSLSRIMVTAVRNLHPVTLSPSPRINILHGANGSGKTSVLEAIHLLGLARSFRSTRLQPV
IHYEQPACTVFGQVQLAEGGSSNLGISRDRQGELQIRIDGQNARSAAQLADLLPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEHRFLGAWQRLQKALRQRNSWLRHGTLDGASQAAWD
RELCSASQEIDTYRRAYIQALKPVFERTLAELLQLEGLTLSYYRGWDKDRELSEVLASSL
LRDQQLGHTQAGPQRADLRLRLAGHNAAEILSRGQQKLVVCALRIAQGHLVNEAKRGQCI
YLVDDLPSELDEQHRQALCRLLEDLHCQVFITCVDHELLREGWHTDTPVAMFHVEHGRIT
QTQDHRE
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtccctgagccgcatcatggtcaccgcggtgcgcaatctgcacccggtgaccctctcc
ccctccccccgcatcaacatccttcacggcgccaacggcagcggcaagaccagcgtgctc
gaggccattcatctgctcggcctcgcccgctccttccgcagcacccgcctgcagcctgtc
atccattacgaacaaccggcctgcaccgtttttggccaggtgcagttggccgaaggtggc
tccagcaatctggggatttcgcgtgaccgtcagggcgagctgcagattcgtatcgacggg
cagaatgcgcgtagcgctgcgcagctggccgatctgttgcctttgcagttgatcaacccg
gacagctttcgcctgctggaaggcgcaccgaagattcgcaggcagtttctcgattggggg
gtgttccacgtggaacatcgttttctcggcgcctggcaacgcctgcagaaagccctgcgg
cagcggaactcgtggctgcgccatggtacacttgacggtgcttcgcaggccgcatgggac
cgagagctgtgcagtgcgagccaggaaatcgacacctaccgtagagcctatatccaggcg
ctgaagccggtgttcgaacgcacgttggcggaactgctgcagctggaagggttgaccctg
agctattaccgcggctgggacaaggatcgtgagctgagcgaagtgctcgcctcgtctctc
cttcgtgatcaacagctcgggcatacccaggccggaccgcagcgcgccgatctgcgtctg
cggcttgcggggcataacgcggcggaaatcctgtcgcgaggacaacagaaactggtggtg
tgtgcgttgcgcatcgcccagggccacttggtcaatgaagccaagcgtggccaatgtatc
tatctggtggacgatctaccgtcggaactggatgagcagcatcgtcaggcattgtgccgg
ttgctggaagatttgcactgccaggtgttcatcacctgtgtggatcatgaattgttgagg
gaaggctggcacacggatacgccggttgccatgttccacgtggaacatggccgtatcacc
cagacccaagaccatcgggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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