KEGG T00510: Pmen

Pseudomonas mendocina ymp: Pmen_0071

Entry

Pmen_0071 CDS T00510

Definition

tryptophan synthase subunit beta (EC:4.2.1.20)

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

pmy Pseudomonas mendocina ymp

Pathway

pmy00260	Glycine, serine and threonine metabolism
pmy00400	Phenylalanine, tyrosine and tryptophan biosynthesis
pmy01100	Metabolic pathways
pmy01110	Biosynthesis of secondary metabolites
pmy01230	Biosynthesis of amino acids

Module

pmy_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Overview; Biosynthesis of amino acids [PATH:pmy01230]
Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:pmy00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pmy00400]

SSDB

Motif

Pfam:

PALP PNP_UDP_1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(68382..69617)

AA seq 411 aa
MTAMPGSQNSFRTGPDARGLFGRFGGQFVAETLMPLINSLAAEYEKAKSDPAFLEELAYF
QRDYIGRASPLYYAERLSQHFGGAKIYLKREDLNHTGAHKINNCIGQILLAKRMGKQRII
AETGAGMHGVATATVAARFGMQCVVYMGTTDIDRQQANVFRMKLLGAEVIPVTAGTGTLK
DAMNEALRDWVTNVHNTFYLIGTAAGPHPYPAMVRDFQSVIGNEVREQILAKEGRLPDSL
VACIGGGSNAIGLFHPFLDDEGVQIIGVEAAGHGIDTGKHAASMAGGAPGVLHGNRTFLL
QDEDGQITDAHSISAGLDYPGVGPEHAWLHEIKRVEYVPISDDEALEAFHHCCRLEGIIP
ALESAHALAEAFKRAPKLPKDHLMVINLSGRGDKDMQTVMHHMQDNQEKHA

NT seq 1236 nt +upstreamnt +downstreamnt
atgacagccatgcctggttcacagaattctttccgcaccggccccgacgctcgcggcctg
ttcggccgcttcggcggtcagttcgtcgccgaaaccctgatgccgctgatcaactcgctg
gccgccgaatacgaaaaggccaagagcgatccggccttcctcgaagaactggcctacttc
cagcgcgactacatcggtcgcgccagcccgctttactacgccgagcgcctgagccagcac
ttcggcggcgcgaagatctacctcaagcgcgaagacctgaaccacaccggcgcgcacaag
atcaacaactgcatcggccagatcctcctggccaagcgcatgggcaagcagcgcatcatc
gccgagaccggcgccggcatgcacggcgtggccaccgccaccgtggccgcgcgcttcggc
atgcagtgcgtggtgtacatgggcaccaccgacatcgaccgccagcaggccaacgtcttt
cgcatgaagctgctcggcgccgaggtaattccggtcaccgccggcaccggcaccctcaag
gacgccatgaacgaggccctgcgcgactgggtgaccaacgtccacaacaccttctacctg
atcggcaccgccgccggcccgcacccgtacccggccatggtccgcgacttccagtcggtg
atcggcaacgaagtgcgtgagcagatcctggcgaaggaagggcgtctgcccgactcgctg
gtggcctgcatcggtggtggctccaacgccatcggcctgttccaccccttcctcgatgat
gaaggcgtgcagatcatcggcgtcgaggcggccggccacggcatcgacaccggcaagcat
gcggcgagcatggccggcggcgcgccgggcgtgctgcacggcaaccgcaccttcctgctg
caggacgaggacggccagatcaccgatgcccactcgatttccgccggcctcgattacccc
ggcgtcggcccggaacacgcctggttgcacgagatcaagcgcgtcgaatacgtgccgatc
agcgatgacgaagccctcgaagccttccaccactgctgccgcctggaaggcatcatcccg
gccctggaaagcgctcatgcgctggccgaagccttcaagcgtgcgccgaaactgcccaag
gatcacctgatggtgatcaacctgtccggtcgtggcgacaaggacatgcagaccgtgatg
caccacatgcaggacaaccaggagaaacacgcatga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-PMY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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