KEGG   Pseudomonas mendocina ymp: Pmen_1071
Entry
Pmen_1071         CDS       T00510                                 
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
pmy  Pseudomonas mendocina ymp
Brite
KEGG Orthology (KO) [BR:pmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmy03400]
    Pmen_1071
Enzymes [BR:pmy01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     Pmen_1071
DNA repair and recombination proteins [BR:pmy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    Pmen_1071
 Prokaryotic type
    Pmen_1071
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-ProteinID: ABP83838
UniProt: A4XR72
Position
complement(1207957..1209390)
AA seq 477 aa
MQQLMWFRSDLRIDDNTALSQAMSRGSTIALYLVTPGQWQRHDDAPCKVDFWLRNLAHLS
RALAALNVPLLIRQCEDWNQAPAVIAEVCHQHNVCAVHANEEYGINENLRDRCVAAYLAQ
QDIAWHSHLDQLLFKPGSILTRSGGYFQVYSQFRKVCYEHLHMALPGLVARPVAQAPTPL
ASDAIPHAVDGFAMPSEQLRSLWPAGEEAARQRLERFADEQIGYYKDERDFPALPGTSQL
SPYLAAGVLSPRQCLHAALAANRGEFDSGNAGVVTWVNELLWREFYKHILVGYPRVSRHR
AFRPETEAVAWRRAPEELAAWQQGRTGLPIIDAAMRQLLETGWMHNRLRMIVAMFLTKNL
LIDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPISQSQKFDSEGRFI
RHWLPELAGLNKRDIHDPASLGGLFAPAGYPRPIVDLSRSRERALAAFRNLGQEVPA
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgcagcaactgatgtggttccgcagcgacctgcggatcgatgacaacaccgcgctgagc
caggccatgagcaggggctcgaccatagcgctgtacctggtcacccccggccagtggcag
cgccatgacgatgccccgtgcaaggtcgacttctggctgcgcaacctggcccatctgagc
cgggcgctggccgccctcaacgtgccgttgctgattcgtcagtgcgaggactggaaccag
gcgccggccgtgatcgccgaggtctgccaccagcacaacgtctgcgcggtgcatgccaac
gaggagtacggcatcaacgaaaacctgcgcgaccgctgcgtggccgcctacctggcccag
caggacatcgcctggcacagccatctcgaccagctgctgttcaagcccggcagcatcctg
acccgctccggcggctacttccaggtctacagccagttccgcaaggtctgctacgagcac
ctgcacatggccctgcccggcctggtcgcccggcccgtggcgcaggcgcccacgcccctc
gccagcgacgcgattccccatgccgtggacggcttcgcgatgcccagcgagcagctgcgc
agcctctggccggccggcgaagaggccgcccgccagcgcctggagcgcttcgccgacgag
cagatcggctactacaaggacgaacgcgacttccccgcgctgcccggcaccagccagctc
tcgccctacctggcagccggcgtgctgtcgccgcgtcaatgcctgcacgccgcactggcc
gccaaccgcggcgagttcgacagcggcaatgcgggcgtcgtcacctgggtcaacgaactg
ctctggcgcgagttctacaagcacattctggtgggctacccgcgcgtctcgcggcatcgc
gccttccgcccggaaaccgaagccgtggcctggcgccgcgcgcccgaggaactggccgcc
tggcagcagggccgcaccggcctgccgatcatcgatgccgccatgcgccagctgctcgag
accggctggatgcacaaccgcctgcgcatgatcgtcgccatgttcctgaccaagaacctg
ctgatcgactggcgcgagggcgagcgcttcttcatgcgccacctgatcgacggcgacctg
gccgcgaacaatggcggctggcagtggagcgcctctaccggtaccgatgcggcgccctac
ttccgcatcttcaaccccatcagccagtcgcagaaattcgactccgagggacgcttcatc
cgccactggctgccggagctggccggcctgaacaagcgcgacatccatgacccggccagc
ctcggcgggctgttcgccccggccggctatccacggccgatcgtcgatctgtcgcgctcg
cgcgaacgcgccctggcggcgttcagaaacctcggccaggaggtgcccgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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