KEGG   Pseudomonas mendocina ymp: Pmen_1580Help
Entry
Pmen_1580         CDS       T00510                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17)
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
pmy  Pseudomonas mendocina ymp
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:pmy00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    Pmen_1580 (fadB)
   01212 Fatty acid metabolism
    Pmen_1580 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    Pmen_1580 (fadB)
   00650 Butanoate metabolism
    Pmen_1580 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    Pmen_1580 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    Pmen_1580 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Pmen_1580 (fadB)
   00310 Lysine degradation
    Pmen_1580 (fadB)
   00380 Tryptophan metabolism
    Pmen_1580 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Pmen_1580 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    Pmen_1580 (fadB)
   00281 Geraniol degradation
    Pmen_1580 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    Pmen_1580 (fadB)
Enzymes [BR:pmy01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     Pmen_1580 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     Pmen_1580 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     Pmen_1580 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     Pmen_1580 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1742502..1744649
Genome map
AA seq 715 aa AA seqDB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRASVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLAVPTVVAINGIALGGGFE
MCLAGDYRVMSETAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIASGKENKAADAL
KVGAVDAVVAPAKLKEAALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLTEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEDVVR
EDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVSDPEAYELLKSIVVEEREVTDEDIINFMMIPLCLETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGALYHPTAKLREMAAKGQKFFG
NT seq 2148 nt NT seq  +upstreamnt  +downstreamnt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaaattcaaccgtcttaccctcaacgagctg
cgcgcctccgtcgacgcgatcaaggccgacggttcgatcaagggcgtgattgtcaccagt
ggcaaggacgtgttcatcgtcggtgccgatatcaccgaattcgtcgacaacttcaaactg
cccgacgaagagctggtggctggcaacctggaagccaacaagatcttcagtgatttcgaa
gacctcgccgtgcccaccgtcgtcgccatcaacggcatcgccctgggtggcggtttcgag
atgtgcctggccggtgactaccgcgtaatgagcgagaccgccaagatcggtctgccggaa
gtcaaactgggcatctacccgggcttcggcggcaccgtgcgcctgcctcgcgtgatcggc
accgacaacgctgtcgagtggatcgcctccggtaaggaaaacaaggctgccgacgccctc
aaggtaggcgccgtcgatgccgtcgtcgcccccgccaagctcaaggaagccgcgctggat
ctggtcaagcgcgccatctccggcgagctggactacaaggccaagcgtcagcccaagctg
gaaaagctcaagctcaacgccatcgagcagatgatgtgcttcgagaccgccaagggcttc
gttgctggccaggccggcccgaactacccggctccggtcgaggcgatcaagaccattcag
aaagccgccaacttcggccgcgacaaggcgctggaagtcgaggccgccggcttcgtcaaa
ctggccaagacctcggtcgccgagagcctgatcggcctgttcctcaacgatcaggaactg
aagaagaaggccaaacaccacgacgaaatcgcccgcgacgtgaaactggctgccgtactc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggcctccaagggcaccccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggcctgaccgaggcctccaagctg
ctcggcaagcgcgtcgagaaaggtcgcatgaccccggcgaagatggctgaagccctcaat
gccatccgtccgaccatgtcctacggtgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggttgagaaccccaaggtcaagcagatcgtgctggccgaagtggaagacgtggtgcgc
gaagacgccatcctggcctccaacacctcgaccatctccatctccctgctggcccaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcattcgtggcgagaagtccagcgaagtggccgtggccaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aaccgcgtgctgttcccgtacttcggtggcttctccaagctgctgggcttcggtgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatgggcccggcctacctc
tccgacgtggtcggcatcgacaccggccaccacggccgtgacgtgatggccgaaggcttc
ccggaccgcatggcggtggaaggcaagaccgctgtcgacgtgatgtacgaagccaatcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaggtctccgaccctgaagcttacgagctgctcaagtccatcgtggtcgaagagcgt
gaagtcaccgacgaggacatcatcaacttcatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgataccgcagccgaggccgatatgggcctgatctac
ggcatcggcttccctcccttccgtggcggtgcgctgcgctacatcgattccatcggtgtc
gccgagttcgtcgccctggccgacaagtacgccgacctgggcgcgctgtaccacccgacc
gccaagcttcgcgaaatggccgccaagggccagaagttcttcggttaa

DBGET integrated database retrieval system