| Entry |
|
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| Gene name |
malS
|
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| Definition |
periplasmic alpha-amylase
|
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| Orthology |
|
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| Organism |
pmy Pseudomonas mendocina ymp
|
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| Pathway |
| Starch and sucrose metabolism | | Metabolic pathways |
|
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| Class |
Metabolism; Carbohydrate metabolism; Starch and sucrose metabolism [PATH: pmy00500]
 |
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-GI: NCBI-GeneID: JGI: UniProt: |
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| Position |
3465317..3467380
 |
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| AA seq |
687 aa  
MRRPSLPTSLTTLACALLCQFASAEPQLQAWLDQRPVPLQWSNPAPQRYSVELELSAGQL
RLQAPNASGSAQPLALYQRQDWHARSSLSLQIGEPGRYRLLFQEDAQPHLRLLPLREQAP
RSACRTWQGEALSVAVGQVFADGEVLRDAYSGQLATVENGRIELTPAAHSDGLLLLEPAE
PAPAPAHDWRNATVYFAITDRFANGDTGNDRSYGRQPDGEQEIGTFHGGDLRGLTGKLDY
LQQLGVNALWISAPFEQIHGWVGGGDKGDFRHYAYHGYYALDFTRLDANMGTEDELRELI
AQAHARGIRVLFDVVLNHPGYSTLADMQVLGFGALRGGMDQYLPPRWSDWQPESFENLHA
YHNLIDYQHDAWRQWWGKDWVRADIADYDSPPSVLVDPRQGSLAFLPDFKTESQQPVSLP
PFLLRKADTRAVPREGYRVRDYLVEWLSFWVREFGVDGFRADTVKHVELESWAALRQAAD
KARAEWSAANPDDPMSGSPFWMVGEVFGHGPQASVYQDHGFDALINFDFQGELAARGSEC
LRQVEDGYRDYAELLANDARHNFMSYASSHDTSLFFAEQGERLARQRGLACALLLAPGAV
QIYYGDESARPLGPTGSDPHQGTRSSMNWDAQQQAPVAELLAHWRLLGQFRARHPAIGAG
RHQQLSSQPYAFARTLGKDRVVIVQGR |
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| NT seq |
2064 nt  +upstreamnt +downstreamnt
atgcgccgcccttcgttgccgacttcgctcaccaccctggcctgcgccctgctctgccag
tttgccagcgccgagccacagctgcaggcctggctggatcaacggccagtgccgctgcaa
tggagcaaccccgcgccgcagcgctacagcgtcgagctggagctgagcgccggccagctg
cgtctgcaggcacccaatgccagcggcagcgcccagccgctggccctgtaccagcgtcag
gactggcacgcgcgcagctcactcagcctgcagatcggcgagcccggccgctatcgcctg
ctgtttcaggaagacgcccagccccatctgcgcctgctgccgctgcgcgagcaggcgccg
cgcagcgcctgccgcacctggcagggcgaggcgctgagcgtcgcggtcggccaggtattc
gccgacggcgaggtgctgcgcgatgcctacagcggccagttggccacggtggaaaacggc
cgcatcgagctgaccccggcagcgcatagcgacggcctgctcctgctcgagccagccgag
ccggcgccagcgcccgcccacgactggcgcaatgccacggtgtatttcgccatcaccgac
cgcttcgccaatggcgataccggcaacgaccgcagctacgggcgccagcccgacggcgag
caggagatcggtaccttccatggcggcgatctgcgcggcctgaccggcaagctcgactac
ctgcagcagctgggggtcaacgcactgtggatcagcgcgcccttcgagcagatccatggc
tgggtcggcggcggtgacaagggcgactttcgccattacgcctaccacggctactacgcc
ctggacttcacccgcctggacgccaacatggggacggaagacgagctgcgcgagctgatc
gcccaggctcacgcccgcggcatccgcgtgctgttcgacgtggtgctcaaccaccccggc
tattcgaccctggccgacatgcaggtgctcggcttcggcgcgctgcgcggcggcatggac
cagtacctgccgccgcgctggagcgactggcagccggagagcttcgagaacctgcacgcc
taccacaacctgatcgactaccagcacgacgcctggcgccagtggtggggcaaggactgg
gtacgcgccgacatcgccgactatgacagcccgcccagcgtgctagtcgacccgcgccag
ggctcgctggccttcctccccgacttcaagaccgagagtcagcagccggtgtccctgccg
cccttcctgctgcgcaaggccgacacccgcgccgtgccacgcgagggctaccgggtgcgc
gactacctggtggaatggctgagcttctgggtgcgcgaattcggcgtcgacggctttcgt
gccgataccgtcaagcacgtcgaactggagagctgggcggcgctgcgccaggcagccgac
aaggcgcgcgccgagtggtcggcggccaaccccgatgatcccatgagcggcagcccgttc
tggatggtcggcgaggtgttcggccacggcccgcaggccagcgtttaccaggaccacggc
ttcgacgcgctgatcaacttcgacttccagggcgagctggccgccaggggcagcgagtgc
ctgcgccaggtcgaggacggctaccgcgactacgccgagctgctggccaacgacgcgcgg
cacaacttcatgagctacgcctcgtcccacgacacctcgctgttcttcgccgaacagggc
gagcgactggcgcgccagcgcggcctggcctgtgcgctgctgctggcacccggcgcggtg
cagatctactacggcgacgaaagcgcgcgcccgctcggccccacgggttcggacccgcac
cagggcacgcgctcgtcgatgaactgggacgcccagcagcaggcgccggtcgccgaactg
ctggcgcactggcgcctgctcggccagttccgcgcgcgccacccggccatcggggccggc
cgccaccagcagctgtccagccagccctacgccttcgcccgcaccctcggcaaggaccgg
gtggtgatagtgcaagggcggtaa |
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