KEGG   Polaromonas naphthalenivorans: Pnap_0903Help
Entry
Pnap_0903         CDS       T00459                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pna  Polaromonas naphthalenivorans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pna00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Pnap_0903
Enzymes [BR:pna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Pnap_0903
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pnap_0903
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
954445..955260
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRLSFAERIAGARIEAVLVGKPLRWPLGCETQQLQGQRVLAVRRRGKYLLL
DLSEGLLLMHLGMSGSVSFGLNLPVTGKHDHFDMVTSLGTLRLHDPRRFGAVVYASGEDD
AVAKKLLGRLGVEPLSDAFDALVFHQWLKGRKTAIKPLLLAGQAVVGVGNIYASEALFLA
GIRPTTKASLISKPRAARLHRAIQDVLTNAVAKGGSTLRDFSNADGEAGHFQLDAMVYDR
AGLPCRVCAAPIKSIRQGQRSSFYCATCQKP
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactgcccgaagttgaagtaacccgcctgagctttgccgagcgcattgcgggt
gcccgcatcgaggctgttctggtgggcaaacccctgcgctggccgctgggctgcgagacg
cagcagttgcagggccagcgcgtcctggccgtgcgccgccggggcaaatacctgttgctc
gacctgagcgaaggcttgctgctgatgcatctgggcatgtcgggcagcgtgagttttggc
ctgaacctgcctgtcacgggcaagcatgaccactttgacatggtgaccagtctgggcacc
ttgcgcctgcatgacccacggcgtttcggggccgtggtctacgctagcggtgaagatgac
gcggtggcgaaaaagctgctgggccggctgggtgtggagcccctgagcgatgcatttgac
gcgcttgtgtttcatcagtggctgaaagggcgcaagaccgcgatcaagccacttttgctg
gcgggccaggccgtcgtcggcgtcggaaacatttatgcctcggaagccttgtttctggcg
ggtattcgtcccaccaccaaagcgtcgctgatcagcaagccgcgcgcggcccggcttcac
cgtgccatccaggacgtgttgacgaatgctgtggccaagggcggaagcacgctgagggat
ttttccaatgccgatggcgaggcgggtcatttccagcttgacgcgatggtgtatgaccgg
gccggtttgccgtgcagagtgtgcgccgcaccaatcaaaagtatccggcagggccagcgt
tcctccttttattgcgccacctgccagaaaccctga

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