KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_0270
Entry
NCGM2_0270        CDS       T01974                                 
Symbol
hcpD
Name
(GenBank) secreted protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02025  Biofilm formation - Pseudomonas aeruginosa
pnc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NCGM2_0270 (hcpD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    NCGM2_0270 (hcpD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnc02044]
    NCGM2_0270 (hcpD)
Secretion system [BR:pnc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NCGM2_0270 (hcpD)
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: BAK87162
Position
1:complement(296633..297151)
AA seq 172 aa
MATPAYMSITGTKQGLITAGAFTEDSVGNTYQEGHEDQVMVQGFNHEVIIPRDPQSGQPT
GQRVHKPVVITKVFDKASPLLLAALTSGERLTKVEIQWYRTSAAGTQEHYYTTVLEDAII
VDIKDYMHNCQDPGNAHFTHLEDVHFTYRKITWTHEVSGTSGSDDWRSPVAG
NT seq 519 nt   +upstreamnt  +downstreamnt
atggcaacccccgcctatatgtccatcaccggcaccaagcagggcctgatcaccgccggc
gccttcactgaggactcggtcggcaacacctaccaggaaggccacgaggaccaggtgatg
gtccagggcttcaaccacgaagtgatcatcccgcgcgacccgcagtccggccagccgacc
ggccagcgcgtgcacaagccggtggtcatcaccaaggtcttcgacaaggcctcgccgctg
ctgctggccgccctgacctccggcgagcgcctgaccaaggtcgagatccagtggtaccgc
acctccgccgccggcacccaggagcactactacaccaccgtcctggaagacgcgatcatc
gtcgacatcaaggactacatgcataactgccaggacccgggcaacgcccacttcacccac
ctggaagacgtgcacttcacctaccgcaagatcacctggacccacgaagtctccggcacc
tccggctccgacgactggcgctcgccggtcgcagggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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