KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_1789
Entry
NCGM2_1789        CDS       T01974                                 
Name
(GenBank) UvrD/REP family helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc03420  Nucleotide excision repair
pnc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCGM2_1789
   03430 Mismatch repair
    NCGM2_1789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnc03400]
    NCGM2_1789
Enzymes [BR:pnc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NCGM2_1789
DNA repair and recombination proteins [BR:pnc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCGM2_1789
   MMR (mismatch excision repair)
    Other MMR factors
     NCGM2_1789
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 AAA_19 AAA_30 Stealth_CR3 PhoH
Other DBs
NCBI-ProteinID: BAK88649
Position
1:complement(1928115..1930145)
AA seq 676 aa
MGNKIVNRLVQNGLLPEARIEPKDHLRTKIAKDAFTQVFKAINGSNVTPDKELIDGFIAF
LLLVKSSTHSPEEVFETRQYGPITQGYVEAFRLYEEHRAQLKVRFFEDQLYDPVKLMLRQ
PATQRYVQNRVDHLIVDEAQDMNGIQIALLKILAGDRAKVMLVGDEDQAIYDWRGAEPDY
LIRGFEQDFPEATRYTLPHTFRFGHMLSIAASQVISCNTNRNPKISISAEGTPRTRIHCL
PLALGLADLGEHVAERLTSGLKLQDIAVLVRTYDLSVTLELDLHQRGIPYHVYGRPPLMR
IPEISALLGVLQLASGRWKTLDANQLRYVIKSLMYRPTLYLDKAAINRVVELVVRQPECL
VEAIRSTITLQTKDYQANQIRDRADLLEILATATDPQDKVLTVLDRYLLATEFERNIEKQ
SPTADQAAAVMANVQAFRLIASRHEGSIDAFLDSIDPLIDSSAMEPPTTPHVWISSIHRA
KGAQWSRVFVPGVVRSGFPRDDLSADEIEAERRLFYVAITRAVDEVFIAHPNDLEFQRSL
ERPDITETHPETSSVSRFLWEMDIALARHAGAAVEEGRFAALGEVDRPEVANTYFATFPF
SKDWRYAKRPQPPSPASAGANHDVVGAAKGTRVIHAIFGSGTIDRWIDDRVLRVVFDDGD
TRLLVASMAPMKIASA
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgggcaacaagatcgtcaatcgacttgtccagaacgggctgcttccagaagccaggata
gaacccaaggatcatctgcggacgaagattgccaaggacgctttcacccaggtgtttaaa
gcgatcaacggcagcaacgtcacgccggacaaggagttgatcgatggatttatcgccttc
ttgctgctggtcaagtcgagcacgcacagccccgaggaggtgttcgaaacacgccagtac
gggccgataacccaagggtacgtcgaggcatttcgtctctatgaagagcaccgggcgcaa
ctgaaggtcaggttttttgaagatcagctgtacgaccccgtcaagctgatgctgaggcaa
cccgcgacacagcgatacgttcagaaccgggttgatcacctcatcgtcgatgaagcccag
gacatgaacggcatccagatcgctctgctgaaaatcctcgccggcgatcgggccaaggtc
atgctcgtcggggatgaagaccaggccatctatgattggcgtggtgccgaacccgactac
ctcatccggggctttgaacaagactttccagaagccacccgatacaccctgccgcacacg
ttccgctttggccacatgctttcgatcgcggccagccaggtaatcagctgcaacaccaat
cgcaaccccaagatcagcatctctgcggagggcacaccgcgcacgcgtatccactgcctg
ccgctggccctcgggctggctgacctgggagaacacgtagcagagcggctcacctccggg
ctgaagctccaggacatcgcggtgctggtgaggacctacgacctgagcgtcaccttggag
ctggatctgcaccaacgcggtatcccctatcacgtctatggccggccgccgctgatgcgt
attcccgagatcagcgcgctgctcggtgtcctccagttggccagtggccgctggaaaacc
ttggatgccaaccagctccgatacgtcatcaagagtttgatgtaccgccctacactctac
ttggacaaggcagcaataaaccgtgtcgtagagctcgtcgtgcgtcagccagaatgcctt
gttgaagccatccgctcgaccatcacactgcaaaccaaagactatcaagccaaccagatt
cgtgaccgtgcggatttgcttgagatcctggcgaccgccaccgatccgcaggataaggtg
ctcaccgtcctggatcgctatctgctggcaacggagttcgaacgcaatatcgaaaagcag
tcccccaccgcggatcaggcggctgccgtcatggcgaacgtccaggccttccgtctcatt
gccagccggcatgaaggcagcatcgacgcgtttctggatagcatcgacccgctcatcgac
tcatcggccatggaaccaccaacaacgccacacgtgtggatcagctccattcatcgagcg
aaaggggcacagtggtcaagggtcttcgtacctggagtcgtgagaagcggctttcccaga
gacgacctaagcgccgatgaaatcgaggcagagcgccggctgttctacgtggccatcacg
cgcgccgtcgatgaggttttcattgctcaccccaacgacctggagtttcagcgcagcctg
gagcgcccggacatcactgaaacgcatccggaaacgagctccgtatctcgctttctttgg
gagatggatattgccttggctcggcatgcaggagccgctgtcgaagaaggacgcttcgcg
gcccttggagaggtagaccgccccgaggtcgcgaatacctatttcgcaaccttccctttc
tctaaagactggcgctatgcaaagcgcccacagccgccctcacccgcgtccgcgggagca
aaccacgacgtcgtcggcgcggcaaaaggaacgcgggtaattcatgccatcttcgggagt
ggaaccatcgacagatggatcgacgatcgcgttctgcgagtcgtttttgacgatggggat
acgcgtctgctggtggccagtatggcgccgatgaagatagcgtcggcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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