KEGG   Pseudomonas aeruginosa NCGM2.S1: NCGM2_5256
Entry
NCGM2_5256        CDS       T01974                                 
Symbol
ribD
Name
(GenBank) riboflavin-specific deaminase/reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pnc  Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc00740  Riboflavin metabolism
pnc01100  Metabolic pathways
pnc01110  Biosynthesis of secondary metabolites
pnc01240  Biosynthesis of cofactors
pnc02024  Quorum sensing
Module
pnc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pnc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NCGM2_5256 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NCGM2_5256 (ribD)
Enzymes [BR:pnc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NCGM2_5256 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NCGM2_5256 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: BAK92077
Position
1:complement(5633207..5634328)
AA seq 373 aa
MNAADPLYMARALELARQGLYSTHPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQ
AGENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVGGRGLLRLMQA
GIAVQSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPAARS
AVQRLRARSSVVLSGADTLLADDARLNVRPDELGLNAELTALAAARQPLRVLVDGRLRVP
LESAFYQAGPALVATCAAASARERFQDAGHELLALPSAEGHVDLHKLLLELAARGANEVL
VEAGPRLAGAFARLGLVDEYRLFVAPKFLGSSARPLLDWPLARMADAAQLRIDDIRAVGD
DWLVTARPHPRDA
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaacgccgccgacccgctgtacatggcccgcgccctggaactggcgcgccaggggctg
tactccacccatccgaatccgcgcgtcggctgcgtgctggtcaaggacggccaggtggtc
ggcgagggctggcacgtccgcgccggcgagccgcacgccgaggtccatgccctgcgccag
gccggcgagaatgcacgcggcgccaccgcctacgtgaccctcgagccctgcagtcatttc
ggccgcaccccgccgtgcgccgacgcgctggtgggtgccggggtggcgcgggtggtcgcg
gcgatgcaggatcccaaccccgaggtcggcggtcgcggcctgctgcgtctgatgcaggcc
ggtatcgcggtgcagagcggggtcctcgaggccgaggcgcgggaactcaacatcggtttc
atcaagcgcatggagcatggcctgccgttcgtccgggtcaagctggcgatgagcctggac
gggcgcaccgccatggccagcggggaaagccagtggatcaccggccccgccgcgcgttcg
gcggtgcagcgcttgcgcgctcgctccagcgtggtgctgtccggcgccgatacgctgctg
gcggacgatgcgcggctcaacgttcgccccgacgaactgggcctgaacgccgagcttacc
gcgctcgccgcggctcgccagccgttgcgggtgctggtcgacgggcgcctgcgggtgccg
ctggaatcggcgttctaccaggccggtccggcactggtggcgacctgcgccgccgcctcg
gcgcgcgaacgcttccaggacgccggtcacgaactgctggcgctgccctccgccgagggg
catgtcgacctgcacaagctgctcctggaactggcggcgcgcggcgccaacgaagtgctg
gtggaggccggcccccgcctggccggcgccttcgcccggctggggctggtggatgagtac
cggctgttcgtcgcgccgaagttcctcggctccagcgcccgtcctttgctcgattggccg
ctggcgcggatggccgatgcggcgcagttgcggatcgacgacatccgcgcggtgggcgac
gactggctggtcaccgcgcggccccatccgcgggacgcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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