KEGG   Pseudoalteromonas nigrifaciens: PNIG_a1778
Entry
PNIG_a1778        CDS       T05271                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
png  Pseudoalteromonas nigrifaciens
Pathway
png03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:png00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PNIG_a1778 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:png03400]
    PNIG_a1778 (xthA)
Enzymes [BR:png01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     PNIG_a1778 (xthA)
DNA repair and recombination proteins [BR:png03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     PNIG_a1778 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_3 MiAMP1
Other DBs
NCBI-ProteinID: ASM53880
UniProt: A0A379HBB0
Position
I:complement(1557931..1558737)
AA seq 268 aa
MKVISFNINGLRARLHQLQAIIDKHQPDIIGLQEIKVHDEAFPLEDVQKMGYHVYYHGQK
AHYGVAMLCKKEPKSVFKGFATDTEESQKRMISVTVEQDNGRDLTVMNGYFPQGENINHE
TKFPYKRQFYKDLMTHLQTNHTPDEDVIVMGDINISPTNLDIGIGEVNAKRWLKTGKCSF
QPIEREWLATLLNWGFKDTFREQNPETSDQYSWFDYRSKGFLDNRGLRIDVVLATHELAA
RCIDTGIDYELRGIEKPSDHAPIWSEFK
NT seq 807 nt   +upstreamnt  +downstreamnt
atgaaagtgatttctttcaatatcaatggtctgcgtgcgcgtcttcatcaattacaagct
attatcgacaaacatcaacccgatattattggcctacaagaaattaaagttcatgacgaa
gcgttcccactagaagatgtacaaaaaatgggatatcacgtttattatcatggccaaaaa
gcccattacggcgtagctatgttatgcaaaaaagaacctaaatcggtatttaaaggcttt
gccactgatactgaagagtcacaaaagcgcatgatcagtgttaccgtagagcaagacaat
ggccgtgatttaacggtaatgaatggttatttcccgcaaggtgaaaacattaatcacgaa
accaagttcccgtataaacgtcagttttataaagatttaatgacccacctgcaaacaaat
catacccctgatgaagacgtgattgtaatgggcgatattaatatttcacctaccaaccta
gatataggtattggcgaagtaaatgctaaacgttggttaaaaaccggtaaatgttctttt
caaccgatagagcgtgaatggctggcaacattacttaattggggctttaaagacaccttt
agagagcaaaacccagaaaccagcgatcaatactcgtggtttgactaccgctcaaaaggg
tttttagataaccgtggcctacgaattgatgttgtacttgcaacacatgagctagccgcg
cgttgtatagacacaggtatagattacgaattacgtggcatcgaaaagccatcggatcat
gcccctatttggtctgaatttaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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