KEGG   Candidatus Protochlamydia naegleriophila: PNK_0413
Entry
PNK_0413          CDS       T04212                                 
Name
(GenBank) putative ABC-type transporter, ATPase subunit
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
pnl  Candidatus Protochlamydia naegleriophila
Pathway
pnl02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pnl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    PNK_0413
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pnl02000]
    PNK_0413
Enzymes [BR:pnl01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     PNK_0413
Transporters [BR:pnl02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    PNK_0413
 Other transporters
  Pores ion channels [TC:1]
   PNK_0413
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N SbcC_Walker_B IstB_IS21 AAA_23 DO-GTPase2 AAA_29
Other DBs
NCBI-ProteinID: CUI16044
UniProt: A0A0U5CN38
Position
cPNK:518213..518953
AA seq 246 aa
MTDKSYSMCLDVQNLVKSYGGKRVVNGLSFQVHRGEIVGLLGPNGAGKTTAFYMTVGLIR
PDEGKVFFQEADVTLIPMHKRARMGMGYLAQEPSVFRSLTVEQNILCILESLPLTKQERK
NRLEELLGELHLEHLAKKKAAALSGGERRRVEITRSLVTNPSLLMLDEPFANIDPLSVQD
VKHLIQLLSKKGISILITDHNAREIFSVVHKSYLVQEGRVALEGTVDELIHNETAKRTYL
GTDFKM
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaccgataagtcttattcaatgtgtttagatgtgcaaaacctggtcaagagttatgga
ggaaagcgagtcgttaatgggctttctttccaggtgcatcgaggggaaattgtgggttta
ttaggtccgaacggcgcgggtaagacgacagccttttatatgacggttggattaatcagg
ccggacgaagggaaggtatttttccaggaagcggatgtgacgcttattcccatgcacaag
cgtgcccggatgggaatggggtatttagcccaagagccttctgtttttcgcagtttaacg
gttgagcaaaatattttatgcattttggagagtcttccgctaaccaaacaagagcgtaaa
aatcgtttagaagagctcttaggtgagcttcacctcgagcatcttgcaaagaagaaggct
gcggccctgtcagggggggagagaaggcgagttgaaattacccgctcgctcgtgaccaat
ccatctctgctcatgctggatgagccttttgccaatattgatccgttatctgttcaagat
gtcaaacacttgattcagctgctttcaaaaaaagggattagcatccttattaccgatcat
aatgcccgcgaaattttttcggtggtccataaaagctatctggttcaagaaggcagggtc
gctcttgaaggcacagttgacgagctcatacacaatgaaacggctaagagaacctacctt
ggcacagatttcaagatgtag

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