KEGG T01161: SNOG

Phaeosphaeria nodorum: SNOG_08115

Entry

SNOG_08115 CDS T01161

Definition

hypothetical protein

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

pno Phaeosphaeria nodorum

Pathway

pno03022	Basal transcription factors
pno03420	Nucleotide excision repair

Module

pno_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:pno03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pno03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3

Other DBs

NCBI-GI:

169610043

NCBI-GeneID:

5975338

UniProt:

Q0UJE9

AA seq 426 aa
MAMLYMPSSFPAADLEAWFKPSARSERVQALDILERLHILGSKREDDKSLSYSLIPGFQR
SLRHAIEGSGTHRTFGVPASKAERGEKRLSIEFLDAHAREQWEGILFFMVSGAAGFQPGS
VKMDVGPGTKKLLHAGDLVRTVHGTPRITKEGFSFVLQETNAQVWNLLIVYLKMVDDLGM
SETEVLSFLFMLGSLELGQDYSTSTLSPSQLHMLDDLSAMGIVYRSSKDSPTFYPTRLAT
TLTSDSGALPGSDVGTTEKPDSKAQNKGFIIVETNYRLYAYTNSLIQIAILSLFTKLQHR
FPNLVSGKLTKESVHRAVQAGITSAQIISYLTTYAHPQMQKSNPPLPPTVMDQIRLWEYE
GERVEVTTGYLMREFGSESEYRDVMGYAQALGVLVWKNDANRCFFVSHVEQVAGYLKKKK
EGKGGR

NT seq 1281 nt +upstreamnt +downstreamnt
atggcgatgctctacatgccctcgtcttttcccgccgccgatctcgaagcctggttcaag
ccctcggcgcgtagcgaacgtgtacaagcccttgatattctcgaacgcctgcatatcctc
ggttcgaaacgggaagacgataagagcttgtcgtactcgctcattccggggtttcagcgt
agcttgcgccatgccatcgaagggtcgggcacgcatcgcacgtttggtgtgccggcgtcg
aaggccgagagaggggagaagaggcttagtattgagtttctggatgcgcatgcaagagag
cagtgggagggcatattgttcttcatggtcagcggagctgcagggttccagccagggagc
gtgaagatggacgtcgggcctgggacgaagaagctgttacatgcgggagatctggtcagg
acagtgcatgggacaccgagaatcactaaggagggattcagcttcgtgctgcaggagacg
aatgcccaggtgtggaatctgctgatagtatacctcaagatggtcgacgatctgggcatg
tcagagaccgaagtcctctccttcctcttcatgctcggctccctcgaactcggccaggac
tactctacttcgaccctctctcccagtcaactccacatgctcgacgacctctctgccatg
ggcatcgtctaccgcagctccaaagactcacccacattctaccccacccgcctcgctacc
accctgacatccgactccggcgccctccccggctcagacgtcggcaccacggagaagccc
gacagcaaggcccaaaacaagggcttcatcattgtcgagaccaactacagactctacgca
tacacaaacagtctgatccagattgccatcctcagcttgtttaccaaactccaacatcga
tttcctaacctcgtctccggcaagctcacaaaggaatccgtccatcgcgccgtccaagca
ggcatcacgtccgcgcaaatcatctcctacttaaccacctacgcccatccgcagatgcaa
aaatctaacccgcccttgccacctaccgtcatggaccagatccgcctgtgggagtacgaa
ggcgagcgtgtcgaagttaccacgggctatttgatgcgggagtttgggtcggagagcgag
tatagagatgtgatgggctatgcgcaggcattgggcgtgctggtgtggaagaatgatgcg
aatagatgcttttttgtcagtcatgtggagcaggtggcggggtacttgaagaagaaaaag
gagggcaagggagggaggtag

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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