KEGG   Paenibacillus naphthalenovorans: IJ22_38010
Entry
IJ22_38010        CDS       T04167                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
pnp  Paenibacillus naphthalenovorans
Pathway
pnp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pnp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    IJ22_38010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pnp03400]
    IJ22_38010
Enzymes [BR:pnp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     IJ22_38010
DNA repair and recombination proteins [BR:pnp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     IJ22_38010
SSDB
Motif
Pfam: AP_endonuc_2 PRMT5_TIM DUF570
Other DBs
NCBI-ProteinID: ALS24139
UniProt: A0A0U2IN85
Position
complement(3787383..3788510)
AA seq 375 aa
MVKIGSHVSFSDKGLLNAAKEAVSYGSGTFMIYTGAPQNTRRKPIESQYIEEGKELMDKH
GIDEIIVHAPYIINLGSYKEDTFELAVRFLQEEIRRTDYIGVKQIVLHPGAYTDKDAEFG
IARIAQGLNEVLAGVKDTDVKIALETMAGKGTEIGRSFEELAQIIEKVDDNGRLSVCFDT
CHVNDAGYDIVNDLDGVLEEFDRVIGLDRIAVVHLNDSKNPIGAGKDRHATVGSGWIGFD
AMNGVVHHEKLKHLPFILETPWIGKQDSYQRPMYEAEIALLGGTVKERFGEEFLSDVERL
AHFFSKQELNPRTYVLQTWEVLKTDAKAKKADGREPMERLYDMVVAEGLFPELTEEQINH
RLTAWFAGEHLFAAV
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggttaaaattggatcacacgtatcgttttcagataaagggctgctgaatgctgcgaaa
gaagctgtttcgtacggctccggcacgtttatgatttatacgggggcgccgcaaaatacg
cgccgcaagccgattgaatcgcagtatatcgaagaaggcaaagagctgatggacaagcat
ggcatcgatgaaattatcgtacatgctccctatatcattaacctgggatcgtataaagag
gacacattcgagctggcggtacgttttcttcaggaagaaattcgccgtacggattatata
ggcgtaaagcagattgtactgcatccgggcgcttacacggacaaggatgccgagttcggt
attgcgcgcatcgctcaaggcttgaatgaggtgctggcaggcgtgaaggatacggatgta
aaaattgcgctggagacgatggctggcaaggggacggaaatcggccgcagtttcgaagaa
ctggcgcagattatcgagaaggtggatgacaacggccgtctgtcagtgtgctttgatacg
tgccacgtgaatgatgcgggttacgatatcgtgaacgatctggatggcgtgctggaggag
tttgatcgtgtgatcggtctggaccgtattgcggtggttcatctgaacgacagcaaaaat
ccgattggagcggggaaagaccgccatgccactgttggctcgggctggatcggtttcgat
gcgatgaacggcgtggttcaccacgagaagctgaagcatctgccgtttatactggagact
ccgtggatcggtaagcaggatagctaccagcgtccgatgtatgaggcggagattgctctg
ttggggggcaccgtgaaagagcggttcggcgaagagttcctctcggatgtagagcgattg
gcgcactttttctcgaagcaggagctgaatccgagaacgtatgtgcttcagacgtgggaa
gttctcaagacggatgccaaagccaaaaaagcggatggccgcgagccgatggagcgactt
tatgacatggttgttgcagaaggcttgttccccgaattaaccgaagaacagattaatcac
cgtttgactgcgtggtttgccggtgagcatttgtttgccgccgtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system