KEGG   Polynucleobacter necessarius subsp. asymbioticus: Pnuc_1917Help
Entry
Pnuc_1917         CDS       T00502                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pnu  Polynucleobacter necessarius subsp. asymbioticus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pnu00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Pnuc_1917
Enzymes [BR:pnu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Pnuc_1917
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pnuc_1917
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1995852..1996688)
Genome map
AA seq 278 aa AA seqDB search
MPELPEVEVTKLGIAPHLQGRTISAIKVIDGRLRWPVPKSLPQILPGQKIQSIARRGKYL
LLELEKGCLLIHLGMTGTLRVLPSSEPLKLHDRVTFEFGRLSLRLHDPRKFGAVLWHPKI
KGPVESNPLLLKLGVEPFSSAFEGELGTGILYQASRKRSVAVKQFLLAGQAVVGVGNIYC
SESLFEAGIHPAKAAGKLTRPQCSRLASAVRSILKKAIDAGGSTLKDFVNSDGDPGHFTV
QSKVYDRKGLPCKVCKTPIQQIVQGQRSTYFCPVCQKR
NT seq 837 nt NT seq  +upstreamnt  +downstreamnt
atgccagaacttccagaagtagaagtcactaaattaggaatagccccccaccttcagggg
aggactattagcgccatcaaggtaatcgatggccgcctgcgctggcctgtacccaaaagc
ttacctcagattttgccgggacagaaaatccagtctattgcgcgacgtggaaagtacttg
ttgttagaacttgaaaagggctgccttctcatccatcttggaatgacaggaaccttacgg
gtattaccaagctcagagcctcttaaattgcatgatcgagttacatttgaatttggtcgt
ttaagtttgcgtttacatgacccaagaaaatttggagcggttttatggcatcctaaaatt
aaagggccggtagaaagcaatccacttttattaaagcttggggtagaacctttttcatcc
gcatttgaaggtgagcttggaacagggattttgtatcaagcttctcgtaagcgaagcgta
gccgtaaagcaatttcttttagcgggtcaagcagttgttggagtgggcaatatttattgt
tctgaaagtttgtttgaggcaggtattcatccagctaaagctgcaggtaagctgacacgc
cctcaatgctcacgactggcaagcgctgtgagaagtattttaaaaaaggcaatagatgct
ggcggtagcactctgaaagactttgtgaatagcgatggcgatcctggccacttcacagtg
caatctaaagtgtacgatcgcaagggcctgccatgtaaagtgtgcaaaacccctatccaa
cagattgtgcaagggcaacgctcaacctatttttgcccagtatgtcaaaaacggtaa

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