KEGG   Polaribacter vadi: LPB03_01295
Entry
LPB03_01295       CDS       T04504                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
pob  Polaribacter vadi
Pathway
pob03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LPB03_01295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pob03019]
    LPB03_01295
   03009 Ribosome biogenesis [BR:pob03009]
    LPB03_01295
Enzymes [BR:pob01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LPB03_01295
Messenger RNA biogenesis [BR:pob03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LPB03_01295
Ribosome biogenesis [BR:pob03009]
 Prokaryotic type
  rRNA helicases
   LPB03_01295
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Helicase_RecD AAA_19 AcylCoA_DH_N
Other DBs
NCBI-ProteinID: AOW16175
UniProt: A0A1B8U152
Position
297018..298139
AA seq 373 aa
MSTFAALGIRKEYIQSIKEIGISKPSEIQEKAIPILLNSKTDFIGLAQTGTGKTAAFGLP
VLHQIDANSPHIQALILSPTRELVQQIKKQLFKFTKYVDEKIFLEAVFGGEKIDRQIGNL
KRTTHIVVATPGRLIDLIERGDIDISHVNTVILDEADEMLSMGFKQDLNRILKFTTKNDR
NTWLFSATMPEEIKKIVKTYMDANAPRVEINPNSLVNENIRHQFIKTTIKEKTGLIIKFI
EKRGAQRGIIFCRTKAGAQNLAHQLIEEGFSAAALEGDMQQKERDKVMRAFKNESLQYLI
STDVSARGIDVRDLEFVIHHQLPEQTDYYTHRSGRTARAGKTGISLALVLPYELERVHEL
QKELNIKFTEVTV
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgtcaacatttgctgcattaggaattcgtaaagaatatatacaatcgattaaagaaata
ggtatttctaaaccttcagaaattcaagaaaaagcgattcctattttattaaattctaaa
accgattttattggtttagcacaaacaggtacaggaaaaacagctgcttttggtttgcct
gttttacatcaaattgatgcaaattctcctcatattcaagctttaattttatcgccaaca
agagaattggtgcaacaaattaaaaaacaactctttaagtttacaaaatatgttgatgaa
aaaatatttttagaagctgtttttggtggtgaaaaaattgatagacaaattggtaattta
aaaagaacaacacatattgttgtagcaactcctggaagattaatcgatttaatagaacgt
ggagatattgatattagtcatgtaaatacggttattttagatgaagctgatgaaatgttg
agtatgggttttaaacaagatttgaatagaatcttaaaattcacgactaaaaacgacaga
aatacttggttattttctgcaacaatgccagaagaaattaagaaaattgtaaaaacgtat
atggatgcaaatgcaccaagagtggaaattaatcctaactctttggtgaatgaaaatatt
cgtcatcaatttataaaaactacgattaaagaaaaaacaggtttaattatcaagtttatc
gaaaaaagaggtgcacaaagaggtattattttttgtagaaccaaggctggagcgcaaaat
ttggctcatcagttaattgaagaaggtttttctgctgctgctttagaaggcgatatgcaa
caaaaagaacgtgataaagtaatgcgtgcttttaaaaatgaaagtctacaatatttaatt
tctacagatgtttctgcacgtggaattgatgtgagagatttagagtttgtaattcatcat
caattaccagaacaaacagattattacactcatagaagtggaagaactgcaagagcagga
aaaacggggatttctttagcattagttttaccttatgaattggaaagagttcatgaactt
caaaaagaattaaatattaaatttacggaagttacagtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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