KEGG   Paenibacillus odorifer: PODO_06225
Entry
PODO_06225        CDS       T03326                                 
Name
(GenBank) pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
pod  Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:pod00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pod03009]
    PODO_06225
Enzymes [BR:pod01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     PODO_06225
Ribosome biogenesis [BR:pod03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PODO_06225
SSDB
Motif
Pfam: PseudoU_synth_2 S4_2 S4
Other DBs
NCBI-ProteinID: AIQ72884
Position
complement(1391469..1392455)
AA seq 328 aa
MNSRRNPKETAKRGTRSHSKPTGKLNHKTKAPAAPKTFTVNEPSELLPFLLTHVTGRGRN
AIKSILSRGQVSVNNKVVTQHNFQLHPGQNVTIDQEKPVQTAEMIGLKIVHEDEDLIIVQ
KDAGLLSIATAEENELTAYHQLMEHVRVSNPQNRIFVVHRLDRDTSGVMMFAKSERIQQA
LQTTWKDTVKERSYVALVEGAVKRPEGKISSWLKETSTLKMYSSPHEGDGLHAITHYKLI
QANRHFSLLEVKLETGRKNQIRVHMADIGHPIAGDKKYGAETKTVGRLGLHARVLSFIHP
TTGELMTFESPIPKTFLKYTAPAPAPTN
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaactcaagaagaaatcctaaggaaacagccaaaagaggtactcgttctcacagcaag
cctactggcaagcttaatcataaaactaaagcacccgcagcacccaaaacatttactgta
aacgaaccttctgaactattgcccttcttactcacccacgtcacgggtcgcggacgaaat
gcgattaaatccatcctatcgcgtggacaagtgtcggtgaataataaggtagttacacag
cataatttccaactgcatccgggtcaaaacgttactattgatcaagagaagcctgtacaa
acagcagagatgatcggacttaaaatcgttcatgaggatgaagacctgattattgttcaa
aaggatgctggactgctatctatcgccactgcggaagaaaatgaattgacggcttaccac
cagctcatggagcatgtccgtgttagcaatccacaaaatcggatttttgtcgtacatcga
ttggacagagatacatcaggcgtaatgatgtttgccaaaagcgaacggattcagcaagcg
ctacaaactacttggaaagataccgtgaaggaacgttcttacgtagcgctcgtggaaggc
gcggttaaaagacctgaaggcaagataagctcgtggctcaaagaaacctcaacccttaaa
atgtattccagtcctcatgaaggtgatggactacatgcaattacacattataaactcatt
caggctaaccgccatttttccttgctagaggttaagctcgaaaccggacgaaaaaatcag
attcgggtgcacatggcagatatcggccaccctatcgcaggtgacaagaaatatggtgca
gagaccaaaacggtaggaagacttggcctacatgctcgagtgctctcttttattcatcca
accactggagaactgatgacctttgagagcccgattccgaagacgttcctgaaatatact
gcgcctgcgcctgcgcctacaaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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