KEGG   Polaromonas sp. JS666: Bpro_2268
Entry
Bpro_2268         CDS       T00343                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
pol  Polaromonas sp. JS666
Pathway
pol03030  DNA replication
pol03430  Mismatch repair
pol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bpro_2268
   03430 Mismatch repair
    Bpro_2268
   03440 Homologous recombination
    Bpro_2268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pol03032]
    Bpro_2268
   03400 DNA repair and recombination proteins [BR:pol03400]
    Bpro_2268
Enzymes [BR:pol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bpro_2268
DNA replication proteins [BR:pol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Bpro_2268
DNA repair and recombination proteins [BR:pol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Bpro_2268
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_22 AAA_18 AAA_14 AAA_30 AAA_5 SKI AAA_2 AAA_assoc_2 Rad17 TsaE nSTAND3 Adeno_E1B_55K_N Herpes_Helicase AAA_28 PIF1 AAA_19 NTPase_1 AAA_16
Other DBs
NCBI-ProteinID: ABE44193
UniProt: Q12B99
Position
2360359..2362191
AA seq 610 aa
MSYLVLARKYRPRNFSEMVGQSHVVQALGNALSTRRLHHAYLFTGTRGVGKTTVSRILAK
SLNCTGVDGQGDITAEPCGVCQACIDIDSGRFVDYTELDAASNRGVDEIAQLLEQAVYKP
VVGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPATVLSRCLQFNL
RPMAPETVLEHLAQVLGTENVPAEPQALRLLARAARGSMRDALSLTDQAIAFGSGQLLEA
SVRTMLGSVDRSYVFRLLDALARGDGKTVVETSEALRLNGLSAASTLEEMTAVLQRMAVL
QAVPDRGGVDDADPEIAETARLAQTLPADETQLLYSLCLHGRGELGLAPDEYAGLTMVLL
RLLAFKPSSAMVPAVQARSPASSLGSAAEPAKKPQPESAIAGARAVPEPAATASVAQPVP
VAVPERSSSQNQGRKDAPAHVNAESVAINSEAPVGLPGVPAPAPRILPTAPAPLATTPLG
DAWSQTVNQLVVAELVAALTRELALQSELRSQDEGMWTLRVERESLNQAAAREKLQAALQ
QALGDTAIRLTVEIGPVSDTPARRNAAALAERQRAAEEMIQNDPFVQDMIRDWGARIVPG
SIRPLAPKPI
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgtcctatctagttcttgcccgcaaataccgtccccgaaatttctctgaaatggtgggt
cagtcgcatgtggtgcaggcacttggcaatgcgctgagcacgcggcgcttgcaccatgcc
tatctcttcaccggcacgcggggcgtcggcaagaccaccgtgtcgcgcattctcgccaag
tcgctcaattgcacgggtgtcgatgggcagggcgacattaccgccgagccctgcggcgtt
tgccaggcatgcatcgacatcgacagtggccgcttcgtcgactacaccgagctcgatgca
gcatccaaccgcggggtggatgaaattgcgcagttgctggagcaggcggtttacaagccg
gtggtgggccgcttcaaggtcttcatgatcgacgaggttcacatgctgacgaacacggcg
ttcaacgccatgctcaagacgctggaggaaccgcccgagtacctcaaatttgtgctcgcc
acgaccgatccgcagaaggtccccgccaccgtgctgtcgcgctgcctacagttcaacctg
cgccccatggcgcctgagacggtgctggaacacctggcccaggtgctgggcaccgaaaat
gtgccggccgaaccacaggccttgcgtctgctggcacgtgcggcccgaggctccatgcgc
gatgcgctgtcgctgaccgaccaggccattgcctttggttcgggccagttgctggaggcc
agcgtgcgcaccatgctgggcagcgtggaccgcagttatgtgtttcgcctgctggatgcg
ctggcgcgcggcgacggcaaaaccgtggtggaaacctccgaagccttgcgactcaatggc
ctgagcgccgcttccacgctcgaagagatgacggccgtgctgcagcgcatggcggtgctg
caggctgtgccggacagggggggcgttgatgatgccgaccccgaaatcgccgagacggcc
cggctggcccagaccttgccggccgacgaaacccagttgctctacagcctgtgcctgcat
ggccgcggcgagctgggtctggcgcccgacgaatatgcgggcctcaccatggtgctattg
cgcttgctggcgttcaagccttcgtccgccatggtgccagccgtgcaggccaggtcgccg
gcctcctcgctggggagcgccgccgagcccgcaaaaaagccgcagcctgagtcggccatt
gccggcgcgcgtgcggttcctgaaccggcggcgacggcatcggtagcccagccggtgcct
gtcgctgtgccggaacgctcctcaagccagaaccaggggagaaaagatgctccagcccat
gtaaatgctgagtctgttgctattaattcagaagcaccggttgggctgcctggcgtgccg
gcgcccgcaccgcggatcttaccgaccgcgcccgcacccctggcgaccacgccgctgggc
gatgcatggagccagaccgttaatcagctggtggtggccgaattggttgccgcgctgacg
cgtgagctggcgctgcagtcagagctgcgcagtcaggatgagggcatgtggaccctgcgc
gtggagcgggagtcattgaaccaggccgccgcccgcgagaaattgcaggctgcgttgcaa
caggcgctcggcgacacggccatcaggctgaccgtggaaataggccccgtgagtgatacc
ccggcacgccgcaatgctgccgcgctggcggagcgtcagcgggccgccgaagagatgatt
cagaacgacccgtttgtgcaggacatgattcgggattggggtgccaggattgttccgggc
agcatcaggccccttgcccccaagccgatatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (42)   

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