KEGG   Polaribacter sp. MED152: MED152_05995
Entry
MED152_05995      CDS       T02533                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
pom  Polaribacter sp. MED152
Pathway
pom03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MED152_05995 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pom03032]
    MED152_05995 (rnhB)
Enzymes [BR:pom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     MED152_05995 (rnhB)
DNA replication proteins [BR:pom03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     MED152_05995 (rnhB)
   Elongation factors (archaeal)
     MED152_05995 (rnhB)
SSDB
Motif
Pfam: RNase_HII Root_cap
Other DBs
NCBI-ProteinID: EAQ42247
UniProt: A2TZX2
Position
complement(1354406..1355005)
AA seq 199 aa
MLKSNYSGCLLEAGTDEAGRGCLSGPVVAAAVILPKNFSHPLLNDSKQLSEKNRQILKPI
IEENAIAHAVSFVYQEEVDKINVLQASITGMHRAIEALDVTPEFIIVDGNKFRNYKEIPH
ETIVKGDAKFLSIAAASVLAKTYRDDYMEKIHQEFSMYNWQKNKGYPTKEHRDAIRKFGA
TIHHRKSFKLLPEQLKLKL
NT seq 600 nt   +upstreamnt  +downstreamnt
atgttaaaatcaaattatagtggttgccttttagaagcaggtacagatgaagcaggtaga
ggttgtttgtctgggccagttgtggcagctgctgttatattacctaagaatttttctcat
ccacttttaaacgattccaagcaattgtcagaaaaaaatagacaaattttaaaaccaatt
atcgaggaaaatgcaattgcacatgctgtatcttttgtgtatcaagaagaggtagataaa
ataaatgtgctccaagcttcaattacaggtatgcacagagcaattgaagcattagatgtt
actccagaatttattattgttgatggtaataagtttagaaattataaagaaattcctcat
gaaaccattgtaaaaggtgatgcaaaatttctaagtattgctgcagcttcagttttggct
aaaacctatagagatgattatatggagaagattcatcaagaatttagcatgtataattgg
caaaaaaataaaggctacccaaccaaagagcacagagatgccattcgtaaatttggagcc
actattcatcatagaaaatcgtttaaattattacctgaacaacttaaattaaagttgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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