KEGG   Polaribacter sp. MED152: MED152_08170
Entry
MED152_08170      CDS       T02533                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pom  Polaribacter sp. MED152
Brite
KEGG Orthology (KO) [BR:pom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pom03019]
    MED152_08170 (rnc)
   03009 Ribosome biogenesis [BR:pom03009]
    MED152_08170 (rnc)
   03036 Chromosome and associated proteins [BR:pom03036]
    MED152_08170 (rnc)
Enzymes [BR:pom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     MED152_08170 (rnc)
Messenger RNA biogenesis [BR:pom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MED152_08170 (rnc)
Ribosome biogenesis [BR:pom03009]
 Eukaryotic type
  90S particles
   RNase
    MED152_08170 (rnc)
 Prokaryotic type
  rRNA processing factors
   MED152_08170 (rnc)
Chromosome and associated proteins [BR:pom03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     MED152_08170 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DUF4826 DND1_DSRM
Other DBs
NCBI-ProteinID: EAQ42682
UniProt: A2TYP2
Position
1851793..1852530
AA seq 245 aa
MNFIRKIVKSQSDEDKELYFELKTLLNFSPKKISKYKKAFTHRSVQMTDSKGNPINYERL
EFLGDSILGSVIASYLYKKVPTGSEGYLTQMRSKIVSREHLNELGKDLELIRFVKSNIDQ
NTVGDNIHGNIFEALVGAIYLDRGYNYAQKFIYENVILPYVNIERLEGKITSYKGLIIEW
CQKQKKKYKFETYEDSGNEAIKHFSVKVSIDGEQVAKGRATSKKKAEEQASKRVYYAFQS
EISAG
NT seq 738 nt   +upstreamnt  +downstreamnt
atgaattttattcgaaaaatagtcaaatctcagtctgatgaagataaagagttatacttc
gaattaaaaaccttgctcaatttttcaccaaagaaaattagtaaatacaaaaaagcgttt
acacacagatctgtgcaaatgacagacagtaaaggaaaccctattaactatgaacgttta
gagtttttaggagattctattttaggctctgttattgcatcttatttgtacaaaaaagta
cctactggttcagaaggttatttaacccaaatgcgatctaaaattgttagtagagagcat
ttaaatgaattaggtaaagacttagaacttattcgttttgtaaaaagtaatattgatcaa
aacactgtaggagataatattcatggaaatatttttgaagctttagttggtgctatttat
ttagatagaggatacaactatgcccaaaaatttatttatgaaaatgtaatattaccttat
gttaatattgagagattagagggtaaaattacaagctacaaaggcttaattatagaatgg
tgccaaaaacagaagaaaaaatataagtttgaaacttatgaggattctggaaacgaagcc
attaaacactttagtgtaaaagttagtattgatggagagcaagttgctaaaggtagagca
acctctaaaaagaaagcagaggaacaagcctcaaagagagtatattacgcctttcaaagt
gaaatttctgcaggctaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (69)   

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