KEGG   Polaribacter sp. MED152: MED152_11509
Entry
MED152_11509      CDS       T02533                                 
Symbol
truA3
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
pom  Polaribacter sp. MED152
Brite
KEGG Orthology (KO) [BR:pom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pom03016]
    MED152_11509 (truA3)
Enzymes [BR:pom01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     MED152_11509 (truA3)
Transfer RNA biogenesis [BR:pom03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    MED152_11509 (truA3)
 Prokaryotic type
    MED152_11509 (truA3)
SSDB
Motif
Pfam: PseudoU_synth_1 Acid_PPase
Other DBs
NCBI-ProteinID: EAQ40658
UniProt: A2U3W9
Position
2565310..2566035
AA seq 241 aa
MRYFIELSYNGKNYHGWQIQPDVISVQEKLNSALSTIFQQDIQVVGAGRTDTGVHASQMF
AHFDVDKNLKGDFAFKLNSILPKDIVVYKVFLVDDEKHARFDAVSRSYEYKIWLGRNPFL
LDFSWQIHSQKPDLKLMNEAAKLLTEYTDFQTFSKVKTEVYTFNCDVTEAFWEQKGEELT
FHISANRFLRNMVRAIVGTLLDVGFGKISIDDFRNIIESKNRGNAGLSVPAKGLFLTQIK
Y
NT seq 726 nt   +upstreamnt  +downstreamnt
ttgaggtattttatagagctttcttataatggaaaaaactatcatggttggcaaattcaa
ccagatgttatttccgtacaagaaaagttgaattctgctttaagcacaatttttcagcaa
gatattcaggtagtaggagcaggaagaacagatacaggagttcatgcctcacaaatgttt
gctcattttgatgttgataaaaaccttaagggtgattttgcatttaagttgaattccatt
ttgcccaaagacattgtggtttataaggtttttttagtagatgatgaaaagcatgcaagg
tttgatgcagtttctagaagttatgaatacaaaatatggttgggtagaaatccattttta
ttagatttttcctggcaaatacattctcagaaaccagatttaaagttaatgaacgaagct
gcaaagttgttaacagaatatacagattttcagactttttctaaagtaaagacagaggtt
tatacttttaattgtgatgttacagaagctttttgggaacaaaaaggtgaggagttaacg
tttcatatatcagcaaatagatttctaagaaatatggttagagccatagttggcacattg
ttagatgttggttttggtaaaatatctatagacgattttagaaatattatagagagtaag
aatagaggtaatgcaggattgtcagttcctgcaaaaggattatttttaacacagataaaa
tattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (50)   

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