KEGG   Pongo abelii (Sumatran orangutan): 100171660
Entry
100171660         CDS       T01416                                 
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100171660 (CNOT6L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100171660 (CNOT6L)
Enzymes [BR:pon01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     100171660 (CNOT6L)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100171660 (CNOT6L)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     100171660 (CNOT6L)
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1
Other DBs
NCBI-GeneID: 100171660
NCBI-ProteinID: NP_001124804
Ensembl: ENSPPYG00000014869
UniProt: Q5REP6
Position
4:complement(75919107..76027780)
AA seq 435 aa
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NYLSRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKPIHAADKQLLIVANAHMHWDP
EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN
GGVADNHKDFKELRA
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttataccatcatgtcagca
gaggaggtagccaatgggaaaaaatctcactgggcagaattagaaatctcgggtagagtg
cggagcctaagtacatcactttggtcattgacacatttgacagcgctgcacctaaatgac
aattaccttagtcgcattccacctgatattgccaagcttcataatctggtttacctggat
ctgtcatccaataaactcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggtcggctcttc
cagctacaaactctaggtttgaaaggcaatcctttatcacaggatattctcaacttatac
caggacccagatggaactcgaaagctactgaacttcatgcttgacaatctcgcagttcat
ccagagcagcttcctccgaggccatggattacattaaaagaacgagaccaaattctgcca
tcagcatcattcacggttatgtgttacaatgtgttatgtgataaatacgctacccggcag
ctatatggctattgcccatcctgggcattaaactgggaatacaggaaaaagggaattatg
gaagaaattgttaactgtgacgcagatatcattagtcttcaggaagtggaaacagagcaa
tacttcactctctttctgccagcattgaaggagcgtggatatgatggatttttttctcca
aagtcacgtgccaaaatcatgtctgagcaggagagaaagcatgtagatggttgtgcaata
ttcttcaaaacagaaaaatttacattggtgcagaagcatacagtggaatttaaccaagtg
gcgatggctaattcagatggatccgaagctatgctgaacagagtcatgacaaaagataac
attggtgtcgctgtggtattagaggtccacaaagaactatttggagcaggtatgaagcct
attcatgctgcagacaaacagctgcttatagtggcaaatgcccacatgcattgggaccca
gagtattctgatgtgaagctcatccagaccatgatgtttgtctcagaggttaaaaacatt
ctggagaaagcctctagtaggcctggcagcccaactgcagatcctaattccatcccgctg
gtgctatgtgcagatcttaactcattgccagattcaggtgttgtggaatacttaagcaat
ggaggagtagctgacaaccataaagacttcaaggaactaagggcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (36)   

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