KEGG   Pongo abelii (Sumatran orangutan): 100172098
Entry
100172098         CDS       T01416                                 
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
pon  Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:pon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pon03000]
    100172098 (SOX6)
Transcription factors [BR:pon03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    100172098 (SOX6)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 100172098
NCBI-ProteinID: NP_001125207
Ensembl: ENSPPYG00000003459
UniProt: Q5RCU4
Position
11:50426577..51075042
AA seq 787 aa
MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLV
NTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTP
ERRKGSLADVVDTLKQKKLEEMTRTEQEDPSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPG
DNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPT
GIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNK
SSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHG
VDGKLSSINNMGLNNCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGSKA
MNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQ
AFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVD
GKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSD
CSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEA
PEAVSAN
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgtcttccaagcaagccacctctccatttgcctgtgcagctgatggagaggatgcgatg
acccaggatttaacctcaagggaaaaggaagagggcagtgatcaacatgtggcctcccat
ctgcctctgcaccccataatgcacaacaaacctcactctgaggagctaccaacacttgtc
aataccattcaacaagatgctgactgggacagcgttctgtcatctcagcaaagaatggaa
tcagagaataataagttatgttccctatattccttccgaaatacctctacctcaccacat
aagcctgacgaagggagtcgggaccgcgagataatgaccagtgttacttttggaacccca
gaacgccgcaaagggagtcttgccgatgtggtggacacactgaaacagaagaagcttgag
gaaatgactcggactgaacaagaagatccctcctgcatggaaaaactactttcaaaagat
tggaaggaaaaaatggaaagactaaataccagtgaacttcttggagaaattaaaggtaca
cctgagagcctggcagaaaaagaacggcagctctccaccatgattacccagctgatcagt
ttacgggagcagctactggcagcgcatgatgaacagaaaaaactggcagcctcacaaatt
gagaaacaacggcagcaaatggaccttgctcgccaacagcaagaacagattgcgagacaa
cagcagcaacttctgcaacagcagcacaaaattaatctcctgcagcaacagatccaggtt
cagggtcacatgcctccgctcatgatcccaatttttccacatgaccagcggaccctggca
gcagctgctgctgcccaacagggattcctcttcccccctggaataacatacaaaccaggt
gataactaccccgtacagttcattccatcaacaatggcagctgctgctgcttctggactc
agccctttacagctccagcagctctatgccgctcagctggccagcatgcaggtgtcacct
ggagcaaagatgccatcaactccgcagccaccaaacacagcagggacggtctcacctact
gggataaaaaatgaaaagagagggaccagccctgtaactcaagttaaggatgaagcagca
gcacagcctctgaatctctcatcccgacccaagacagcagagcctgtaaagtccccaacg
tctcccacccagaacctcttcccggccagcaaaaccagccctgtcaatctgccaaacaaa
agcagcatccctagccccattggaggaagcctgggaagaggatcctctttagatatccta
tctagtctcaactcccctgccctctttggggatcaggatacagtgatgaaagccattcag
gaggcgcgaaagatgcgagagcagatccagcgggagcaacagcagcaacagccacatggt
gttgatgggaaactgtcctccataaataatatggggctgaacaactgcaggaatgaaaag
gaaagaacacgctttgagaatctggggccccagttaacgggaaagtcaaatgaagatgga
aaactgggcccaggtgtcatcgaccttactcggccagaagatgcagagggaagtaaagca
atgaatggctctgcagctaaactacagcagtattattgttggccaacaggaggtgccact
gtggctgaagcacgagtctacagggacgcccgcggccgtgccagcagcgagccacacatc
aagcgaccaatgaatgcattcatggtttgggcaaaggatgagaggagaaaaatccttcag
gccttccccgacatgcataactccaacattagcaaaatcttaggatctcgctggaaatca
atgtccaaccaggagaagcaaccttattatgaagagcaggcccggctaagcaagatccac
ttagagaagtacccaaactataaatacaaaccccgaccgaaacgcacctgcattgttgat
ggcaaaaagcttcggattggggagtacaagcaactgatgaggtctcggagacaggagatg
aggcagttctttactgtggggcaacagcctcagattccaatcaccacaggaacaggtgtt
gtgtatcctggtgctatcactatggcaactactacaccatcgcctcagatgacatctgac
tgctctagcacctcggccagcccggagcccagcctcccggtcatccagagcacttatggt
atgaagacagatggtggaagcctagctggaaatgaaatgattaatggagaggatgaaatg
gaaatgtatgatgactatgaagatgaccccaaatcagactatagcagtgaaaatgaagcc
ccggaggctgtcagtgccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (35)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (33)   
DNA sequence (35)   
   RefSeq(nuc) (33)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (80)   

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