KEGG   Pongo abelii (Sumatran orangutan): 100439697
Entry
100439697         CDS       T01416                                 
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
  KO
K04558  synphilin-1
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon05012  Parkinson disease
pon05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pon00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05012 Parkinson disease
    100439697 (SNCAIP)
   05022 Pathways of neurodegeneration - multiple diseases
    100439697 (SNCAIP)
SSDB
Motif
Pfam: SNCAIP_SNCA_bd Ank_2 Ank_4 Ank Ank_5 Ank_3 Lzipper-MIP1
Other DBs
NCBI-GeneID: 100439697
NCBI-ProteinID: XP_024102883
Position
5:119436912..119588668
AA seq 1017 aa
MEAPEYLDLDEIDFSDDISDNRSQGNRLQKLGLEGTDREDALGFGSHRAKLTVVAALGAC
HCPENEYSVTSLKTIPELCRRCDTQNEDRSVSSSSWNCGISTLITNTQKPTGIADVYSKF
RPVKRVSPLKHQPETLENNESDDQKNQKVVEYQKGGESDLGPQPQELSPGDGVGGPPGKS
SEPSTSLGELEHYDLDMDEILDVPYIKSSQQLASFTKVTSEKRILGLCTTINGLSGKACS
TGSSESSSSNMAPFCVLSPVKSPHLRKASAVIHDQHKLSTEETEISPPLVKCGSAYEPEN
QSKDFLNKTFSDPHGRKVEKTTPDCQLRAFHLQSSAAESKAEEQVSGLNWTSSQGPEERS
EYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQGHAECLQHLTSLM
GEDCLNERNTEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPSLIHYAGCYGQE
KILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYGANVTMQNHAGEKP
SQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSE
GKSLPSSPSSPSSPASRKSQWKSPDADDDSVAKSKPGVQEGIQVLGSLSASSRARPKAKD
EDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNSKKIPLEKRELKLARLRQLMQR
SLSESDTDSNNSEDPKNTPVRKADRPRPQPIVESVESMDSAESLHLMIKKHTLASGGRRF
PFSIKASKSLDGHSPSPTSESSEPDLESQYPGSGSIPPNQPSGDPPQPSPDSTTAQKVAT
SPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQPSLELNGEKDKDKGRTLQRTSTSNES
GDQLKRPFGAFRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRKTTDAKGNPASSAS
KGKNKAEMYSSCINLSSNMLIEEHLHNDARHNDINRKMKKSYSIKHTAEPESKELFL
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggaagcccctgaataccttgatttggatgaaattgactttagtgatgacatatctgac
aataggagtcaagggaacaggctgcaaaagcttggattggagggcacagacagggaagat
gcattgggctttggttcccatagggccaaactgacagtagttgctgccctgggagcttgc
cattgtcctgagaatgagtattcagtcacatcactcaagacgatcccagaactgtgccga
agatgtgatacacaaaacgaagacagatcagtttctagctctagctggaattgtggcatc
tcaactcttattacaaacacgcaaaagcccacaggaatcgctgatgtgtacagtaagttc
cgcccagtgaagcgggtttcgccactgaaacatcagccagagactctggagaacaatgaa
agtgatgaccaaaagaaccagaaagtggttgagtaccagaaagggggtgagtctgacttg
ggcccccagcctcaggagctcagccctggagatggagtgggtggcccaccaggtaagagc
tctgagcccagcacatcgctgggtgaactggagcactacgacctcgacatggatgagatt
ctggatgtgccttatattaaatccagtcagcagcttgcctcttttaccaaggtgacttca
gaaaaaagaattttgggcttatgcacaaccatcaatggcctttctggcaaagcctgctct
acaggaagttctgagagctcatcatccaacatggcaccattttgtgttctttctcccgtg
aaaagccctcacttgagaaaagcatcagctgtcatccacgaccagcacaagctgtccact
gaagaaaccgagatctcacctcctctggttaaatgtggctctgcatatgagcctgaaaac
cagagtaaagacttcctaaacaagacatttagtgatcctcatggtcgaaaagttgagaag
acaacaccagactgccagctcagggccttccacctacaatcctcagcagcagaatccaaa
gcagaagagcaggtcagtggcctaaactggaccagctcccaaggcccagaagaaaggagt
gaatatctgaaaaaagtgaaaagcatcttaaacattgttaaagaaggacagatctctctc
ctgccacacctagctgcagacaatctagacaaaattcacgacgaaaatggaaacaatcta
ttacatattgcggcatcacagggacacgcagagtgtctacagcacctcacttctttgatg
ggagaagactgcctcaatgagcgcaacactgagaagttgactccagcaggcctggccatt
aagaatggtcagttggagtgcgtacgctggatggtgagtgaaacagaagccattgcagaa
ctgagttgttctaaggattttccaagccttattcattacgcaggttgctatggccaggaa
aagattcttctatggcttcttcagtttatgcaagaacagggcatctcgttggatgaagta
gaccaggatggcaacagtgctgttcacgtagcctcacagcatggctaccttggatgcata
cagactttggttgaatatggagcaaatgtcaccatgcagaaccacgctggggaaaagccc
tcccagagcgctgagcggcaggggcacaccctgtgctccaggtacctggtggtggtggag
acctgcatgtcgctggcctctcaagtggtgaagttaaccaagcagctaaaggaacaaaca
gtagaacgtgtcacgctgcagaaccaacttcaacaatttctagaagcccagaaatcagag
ggcaagtcactcccttcttcacccagttcaccgtcctcacctgcctccagaaagtcccag
tggaaatctccagatgcagatgatgattctgtagccaaaagcaagccaggagtccaagag
gggattcaggttcttggaagtctgtcagcctccagccgggctagacccaaagcaaaagat
gaagattctgataaaatcttacgccagttattgggaaaggaaatctcagaaaatgtctgc
acccaggaaaaactgtccttggaattccaggatgctcaggcttcctctagaaattctaaa
aagatcccactggagaagagggaactgaagttagccaggctgagacagctgatgcagagg
tcactgagtgagtctgacacggactccaacaactctgaggaccccaagaataccccagtg
aggaaggctgaccgaccaaggccacagcccattgtagaaagcgtagagagtatggacagt
gcagaaagcctgcacctgatgatcaagaaacacaccttggcatcaggcggacgcaggttt
cccttcagcatcaaggcctccaaatccctggacggccatagcccatctcccacctcagag
agcagtgaaccagacttagaatcccagtatccaggctcagggagtattcctccaaaccag
ccctctggtgaccctccacagcccagccctgacagcactactgcccagaaagttgccaca
agtcccaagagtgccctcaagtctccatcttccaagcgcaggacatctcagaacttaaaa
ctgagagttacctttgaggagcctgtggtgcagatggagcagcctagccttgaactgaat
ggagaaaaagacaaagataagggcaggactctccagcggacctccacaagtaacgaatca
ggggatcaactgaaaaggccttttggagcctttcgatctatcatggagacactaagtggc
aaccaaaacaataataataactaccaggcagccaaccagctgaaaacctctacgttgccc
ttgacctcacttgggaggaagacaacagatgccaagggaaaccctgccagctccgccagc
aaaggaaagaataaggcagaaatgtacagcagctgcatcaatctttcctctaacatgctg
attgaagagcatctgcataacgacgcacggcataatgacatcaatagaaaaatgaagaaa
tcctacagcataaagcacactgctgagccagagtcaaaagaactcttcttgtaa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system