| Entry |
|
| Gene name |
VCAN
|
| Definition |
versican
|
| Orthology |
|
| Organism |
pon Pongo abelii (Sumatran orangutan)
|
| Pathway |
| Cell adhesion molecules (CAMs) |
|
| Class |
Environmental Information Processing; Signaling molecules and interaction; Cell adhesion molecules (CAMs) [PATH: pon04514]
 |
| SSDB |
   |
| Motif |
 |
| Other DBs |
NCBI-GI: NCBI-GeneID: Ensembl: UniProt: |
| Position |
5
|
| AA seq |
3395 aa  
MFINIKSILWMCSTLIVTLALHKVKVGKSPPVRGSLSGKVSLPCHFSTMPTLPPSYNTSE
FLRIKWSKIEVDKNGKDLKETTVLVAQNGNIKIGQDYKGRVSVPTHPEAVGDASLTVVKL
LASDAGLYRCDVMYGIEDTQDTVSLAVDGVVFHYRAATSRYTLNFEAAQKACLDIGAVIA
TPEQLFAAYEDGFEQCDAGWLSDQTVRYPIRAPRVGCYGDKMGKAGVRTYGFRSPQETYD
VYCYVDHLDGDVFHLTVPNKFTFEEAAKECENQDARLATVGELQAAWRNGFDQCDYGWLS
DASVRHPVTVARAQCGGGLLGVRTLYRFDNQTGFPPPDSRFDAYCFKPKEATTIDLSILA
ETASPSLSKEPQMVSDRTTSVIPLVDELPVIPTEFPPVGNIVNFEQKATVQPQAVTDSLA
TKLPTPTGSTKKPWDMDDYSPSASGPLGKLDISEIKEEVLQSTTGVSHYATDSWDGVVED
TQTQESVTQIEQIEVGPLVTSMEILKHIPSKEFAVTETPFVTARMTLESKTEKKMVSTVS
ELITTGHHGFTLGEEDDEDRTLTVGSDESTLIFDQVPEVITVSKTSEDTIHTQLEDLESV
SASTTVSPLIMPDNNGSSMDDWEERQTSSRITEEFLGKYLSTTPFLSQHHTEIELFPYSG
DKILVEGISTVIYPSLQTEMTHRRERTETLIPEMRTDTYTDEIQEEITKSPFMGKTEEEV
FSGVKLSTSPSEPIHVTESSVEMTKSFDFPTLITKLSAEPTEVRDKEEDFTATPGTTKYD
ENITTVLLAHGTLSVEAATVSKWSWDEDNTTSKPLESTEPSASSKLPPALLTTVGMNGKD
KEIPSFTEDGVDEFTLIPDSTQKQLEEVTDEDIAAHGKFTIRFQPTTSIGIAEKSTLRDS
TTEEKVPPITSTEGQVYATMEGSALDEVEDVDLSKPVSTVPQFAHTSEVEGLAFVSYSST
QEPTTYVDSSHTIPLSVIPKTDWGVLVPSVPSEDEVLGEPSQDILVIDQTRLEATISPET
MRTTKITEGTTQEEFPWKEQTAEKPVPALSSTAWTPKEAVTPLDEQEGNGSAYTVSEDEL
LTGSERVPVLETTPVGKIDHSVSYPPGAVTEHKVKIDEVVTLTPHIGPKVSLSPGPEQKY
ETEGSSTTGFTSSLSPFSTHVTQLMEETTTEKTSLEDIDLGSGLFEKPKATELIEFSTIK
VTVPSDITTAFSSVDRLHTTSAFKPSSAITKKPPLIDREPGEETTSDMVIIGESTSHVPP
TTLEDIVAKETETDIDREYFTTSSPSATQPTRPPTVEDKEAFGPQALSTPQPPARTKFHP
DINVYIIEVRENKTGRMSDLSVIGHPIDSESKEDEPCSEETDPVHDLMAEILPEFPDIIE
IDLYHSEENEEEEEECANATDVTTTPSVQYINGKHLVTTVPKDPEAAEARRGQFESVAPS
QNFSDSSESDTHPFVTAKIELSTAVQPNESTETTESLEITWKPETYPETSEHFSGGEPDV
FPTVPFHEEFESGTAKKGAESVTERDTEVGHQAHDHTEPVTLFPEESSGEIAIDQESQKI
AFARATEVTFGEEVEKSTSVTYTPTIVPSSASAYVSEEETVTLIGNPWPDDLLSTKESWV
EATPRQVVELSGSSSIPITEGSGEAEADEDTMFTMVTDLSQRNTTDTLITLDTSRIITES
FFEVPATTIYSVSEQPSAKVVPTKFVSKTDTSEWISSTSVEEKKRKEEEGTTGTASTVEV
YSPTQRSDQLILPSELESPNVATSSDSGTRKSFMSLTTPTQSEREMTDSTPVFTETNTLE
NLGAQTTEHSSIHQPGVQEGLSTLPRSPASVFMEQGSGEAAADPETTTVSSFSLNLEYEI
QAKKEAAGTSSPHVETTFSTEPTGLVLSTVMDREVAENISQTSREIVISERLGEPNYGAE
IRGFSTGFPLEEDFSGDFREYSTVSHPIAKEEMVMMEGSGDAAFRDTQTLPSTVPTSVHI
SHISDSEGPSSTMVSTSAFPWEEFTSSAEGSGEQLVTVSSSVVPVLPSAVGKFSGTASSI
IDEGLGEVGTVNEIDRRSTILPTAEVEGTKAPVEKEEVKVHGTISTNFPQTMEPAKLWSR
QEVNPVRQEIESETTSEEQIQEEKSFESPQNSPATEQTIFDSQTFTETELKTTDYSILTT
KKTYSDDKEMKEEDTSLVNMSTPDPDANGLESYTTLPEATEKSHFFLATALVTESIPAEH
VVTDSPIKKEESTKHFPKGMRPTIQESDTELLFSGLGSGEEVLPTLPTESVNFTEVEQIN
NTLYPHTSQVESTSSDKTEDSNRMENVAKEVGPLVSQTDIFEGSGSVTSTTLIEILSDTG
VEGPTVAPLPFSTDIGHLQNQTLRWAEEIQTSRPQTITEQDSNKNSSTAEINETTTSSTD
FLARAYGFEMAKEFVTSAPKPSDLYYEPSGEGSGEVDIVDSFHTSATTQATRQESSTTFF
SDGSLEKHPEVPSAKAVTADGFPTVSVMLPLHSEQNKISPGPTSTLSNTVSYERSTDGSF
QDRFREFEDSTLKPNRKKPTENIIIDLDKEDKDLILTITESTILEILPELTSDKNTIIDI
DHTKPVYEDILGMQTDIDPEVPSEPHDSNDESKDDSTQVQETYEAAVNLSLTEETFEGSG
DVLASYTQATHDESMTYEDRSQLGHMGFNFTTGIPAPSTETELDILLPTATSLPIPHKSA
TVIAEIEGIKAEAKALDDMFESSTLSDGQAIADQSEIIPTLGQFERTQEYEDKKHAGPSF
QPEFSSGAEEALVDHTPYLSIATTHLMDQSLTEVPNVMEGSNPPYYTDTTLAVSAFAKLP
SQTPSSPLTLYSGSEASGHTEIPQPSALPGIDVSSSVMSPQDSFKEIHVNIEATFKPSSE
EYLHVTKPPSLSPDTKLEPSEDDGKPESLEETEASPTELIAVEGTEILQDFQNKTDGQVS
GEAIKMFSTIKTPEAGTVITTADEIKLEGATQWPHSTSASATYGVEAGVVPWLSPQTSER
PTLSSSPEINPETQAALIRGQDSTTAGSEQQVAARILDSNNQATVTPVEFNTEVATPPFS
LLETSNETDFLIGINEESVEGTAIYLPGPDRCKMNPCLNGGTCYPTETSYVCTCVPGYSG
DQCELDFDECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCY
KYFAHRRTWDAAERECRLQGAHLTSILSHEEQMFVNRVGHDYQWIGLNDKMFEHDFRWTD
GSTLQYENWRPNQPDSFFSAGEDCVVIIWHENGQWNDVPCNYHLTYTCKKGTVACGQPPV
VENAKTFGKMKPRYEINSLIRYHCKDGFIQRHLPTIRCLGNGRWAIPKITCMNPSAYQRT
YSMKYFKNSSSAKDNSINTSKHDHRWSRRWQESRR |
| NT seq |
10188 nt  +upstreamnt +downstreamnt
atgttcataaatataaagagcatcttatggatgtgttcaaccttaatagtaacccttgcg
ctacataaagtcaaagtgggaaaaagcccaccggtgaggggctccctctctggaaaagtc
agcctgccttgtcatttttcaacgatgcctactttgccacccagttacaacaccagtgaa
tttctccgcatcaaatggtctaagattgaagtggacaaaaatggaaaagatttgaaagag
actactgtccttgtggcccaaaatggaaatatcaagattggtcaggactacaaagggaga
gtgtctgtgcccacacatcccgaggccgtgggcgatgcctccctcactgtggtcaagctg
ctggcaagtgatgcgggtctctaccgctgtgacgtcatgtacgggattgaagacacacaa
gacacggtgtcactggctgtggatggggttgtgtttcactacagggcggcaaccagcagg
tacacactgaattttgaggctgctcagaaggcttgtttggacattggggcagtcatagca
actccagagcagctctttgccgcctatgaagatggatttgagcagtgtgacgcaggctgg
ctgtctgatcagactgtcagatatcccatccgggctcccagagtaggctgttatggagat
aagatggggaaggcaggagtcaggacctatggattccgttctccccaggaaacttacgac
gtgtattgttatgtggatcatctggatggtgatgtgttccacctcactgtccccaataaa
ttcaccttcgaggaggctgcaaaagagtgtgaaaaccaggacgccaggctggcaacagtg
ggggaactccaggcggcgtggaggaacggctttgaccagtgcgattacgggtggctgtca
gatgccagcgtgcgccaccctgtgactgtggccagggcccagtgtggaggtggtctactt
ggggtgagaaccctgtatcgttttgacaaccagacaggcttccctccccctgatagcaga
tttgatgcctactgctttaaacctaaagaggctacaaccatcgatttgagtatcctcgca
gaaactgcatcacccagtttatccaaagaaccacaaatggtttctgatagaactacatca
gtcatccctttagttgatgaattacctgtcattccaacagagttccctcccgtgggaaat
attgtcaattttgaacagaaagccacagtccaacctcaggctgtcacagatagtttagcc
accaaattacccacacctactggcagtaccaagaagccttgggatatggacgactactca
ccttctgcttcaggacctcttggaaagctagacatatcagaaattaaggaagaagtgctc
caaagtacaactggcgtctctcattatgctaccgattcatgggatggtgtcgtggaagat
acacaaacacaagaatcggttacacagattgaacaaatagaagtgggtcctttggtaaca
tctatggaaatcttaaagcacattccttccaaggaattcgctgtaactgaaacaccattc
gtaactgcaagaatgaccttggaatccaaaactgaaaagaaaatggtaagcaccgtttct
gaattgataaccacaggtcaccatggattcaccttgggagaagaggatgatgaagacaga
acacttacagttggatctgatgagagcaccttgatctttgaccaagtgccggaagtcatt
acggtgtcaaagacttcagaagacaccatccacactcagttagaggacttggagtcagtc
tcagcatccacaactgtttcacctttaattatgcctgacaataatggatcatccatggat
gactgggaagagagacaaactagtagtaggataacggaagagtttcttggcaaatatctg
tctactacaccttttctatcacagcatcatacagaaatagaattatttccttattctggt
gataaaatattagtagagggaatttctacagtcatttatccttctctacaaacagaaatg
acacatagaagagaaagaacagaaacactaataccagagatgagaacagatacttataca
gatgaaatacaagaagagatcactaaaagcccatttatgggaaaaacagaagaagaagtc
ttctctggggtgaaactctctacatctccctcagagccaattcatgttacagagtcttct
gtggaaatgaccaagtcttttgatttcccaacattgataacaaagttaagtgcagagcca
acagaagtaagagataaggaggaagactttacagcaactccaggtactacaaaatatgat
gaaaatattacaacagtgcttttggcccatggtactttaagtgttgaagcagccactgta
tcaaaatggtcatgggatgaagataatacaacatccaagcctttagagtctacagaacct
tcagcctcttcaaaattgccccctgccttactcacaactgtggggatgaatggaaaggat
aaagaaatcccaagtttcactgaagatggagtagatgaatttactcttattccagatagt
actcaaaagcagttagaggaggttactgatgaagacatagcagcccatggaaaattcaca
attagatttcagccaactacatcaattggtattgcagaaaagtcaactttgagagattcc
acaactgaagaaaaagttccacctatcacaagcactgaaggccaagtttatgcaaccatg
gaaggaagtgctttggatgaagtagaagatgtggacctctctaagccagtatctactgtt
ccccaatttgcacacacttcagaggtggaaggattagcatttgttagttatagtagcacc
caagagcctactacttatgtagactcttcccataccattcctctttctgtaattcccaag
acagactggggagtgttagtaccttctgttccatcagaagatgaagttctaggtgaaccc
tctcaagacatacttgtcattgatcagactcgccttgaagcgactatttctccggaaact
atgagaacaacaaaaatcacagagggaacaactcaggaagaattcccttggaaagaacag
actgcagagaaaccagttcctgctctcagttctacagcttggactcccaaggaggcagta
acaccactggatgaacaagagggcaatggatcagcatatacagtctctgaagatgaattg
ttgacaggttctgagagggtcccagttttagaaacaactccagttggaaaaattgatcac
agtgtgtcttatccaccaggtgctgtaactgagcacaaagtgaaaattgatgaagtggta
acactaacaccacacattgggccaaaagtatctttaagtccagggcctgaacaaaaatat
gaaacagaaggtagtagtacaacaggatttacatcatctttgagtccttttagtacccat
gttacccagcttatggaagaaaccactactgagaaaacatccctagaggatattgattta
ggctcaggattatttgaaaagcccaaagccacagaactcatagaattttcaacaatcaaa
gtcacagttccaagtgatattaccactgccttcagttcagtagacagacttcacacaact
tcagcattcaagccatcttccgcgatcactaagaaaccacctctcatcgacagggaacct
ggtgaagaaacaaccagtgacatggtaatcattggagaatcaacatctcatgttcctccc
actacccttgaagatattgtagctaaggaaacagaaaccgatattgatagagagtatttc
acgacttcaagtccttctgctacacagccaacaagaccacccactgtggaagacaaagag
gcctttggacctcaggcactttctacgccacagcccccagcaaggacaaaatttcaccct
gacattaatgtttatattattgaggtcagagaaaataagacaggtcgaatgagtgatttg
agtgtaattggtcatccaatagattcagaatctaaagaagatgaaccttgtagtgaagaa
acagatccagtgcatgatctaatggctgaaattttacctgaattccctgacataattgaa
atagacctataccacagtgaagaaaatgaagaagaagaagaagagtgtgcaaatgctact
gatgtgacaaccaccccatctgtgcagtacataaatgggaagcatctcgttaccactgtg
cccaaggacccagaagctgcagaagctaggcgtggccagtttgaaagtgttgcaccttct
caaaatttctcggacagctctgaaagtgatactcatccatttgtaacagccaaaatagaa
ttgtctactgctgtgcaacctaatgaatctacagaaacaaccgaatctcttgaaattaca
tggaagcctgagacttaccctgaaacatcagaacatttttcaggtggtgagcctgatgtt
tttcccacagtcccattccatgaggaatttgaaagtggaacagccaaaaagggggcagaa
tcagtcacagagagagatactgaagttggtcatcaggcacatgatcatactgaacctgta
actctgtttcctgaagagtcttcaggagagattgccattgaccaagaatctcagaaaata
gcctttgcaagggctacagaagtaacatttggtgaagaggtagaaaagagtacttctgtc
acatacactcccactatagttccaagttctgcatcagcatatgtttcagaggaagaaaca
gttaccctaataggaaatccttggccagatgacctgttgtctaccaaagaaagctgggta
gaagcaactcctagacaagttgtagagctctcagggagttcttcaattccaattacagaa
ggctctggagaagcagaagcagatgaagatacaatgttcaccatggtaactgatttatca
cagagaaatactactgatacactcattactttagacactagcaggataatcacagaaagc
ttttttgaggttcccgcaaccaccatttattcagtttctgaacaaccttctgcaaaagtg
gtgcctaccaagtttgtaagtaaaacagacacttctgagtggatttccagtacctctgtt
gaggaaaagaaaaggaaggaggaggagggaactacaggtacggcttctacagttgaggta
tattcacctacacagagatcggatcaattaattttaccctctgaattagaaagtccaaat
gtagctacatctagtgattcaggtaccaggaaaagttttatgtccttgacaacaccaaca
cagtctgaaagggaaatgacagattctacgcctgtctttacagaaacaaatacattagaa
aatttgggggcacagaccactgagcacagcagtatccatcaacctggggttcaggaaggg
ctgtccactctcccacgtagtcctgcctctgtctttatggagcagggctctggagaagct
gctgctgacccagaaaccaccactgtttcttcattttcattaaatttagagtatgaaatt
caagccaaaaaggaagcagctggcacttcatctccacatgtggaaactacgttctccact
gagccaacaggactggttttgagtacagtaatggacagagaagttgctgaaaatataagc
caaacatccagggaaatagtgatttcagagcgattaggagaaccaaattatggggcagaa
ataaggggcttttccacaggttttcctttggaggaagatttcagtggtgactttagagaa
tactcaacagtgtctcatcccatagcaaaagaagaaatggtaatgatggaaggctctgga
gatgcagcatttagggatacgcagactttaccatctacagtacctacttcagttcacatc
agtcacatatctgactcagaaggacccagtagcaccatggtcagcacttcagccttcccc
tgggaagagtttacatcctcagctgagggctcaggtgagcaactggtcacagtcagcagc
tctgttgttccagtgcttcccagtgctgtgggaaagttttctggtacagcttcctccatt
attgacgaaggattgggagaagtgggtactgtcaatgaaattgatagaagatccaccatt
ttaccaacagcagaagtggaaggtacaaaagctccagtagagaaggaggaagtaaaggtc
catggcacaatttcaacaaactttccccaaactatggagccagccaaattatggtctagg
caagaagtcaaccctgtaagacaagaaattgaaagtgaaacaacatcagaggaacaaatt
caagaagaaaagtcattcgaatccccccaaaactctcctgcaacagaacaaacaatcttt
gattcacagacatttactgaaactgaactcaaaaccacagattattctatactaacaaca
aagaaaacttacagtgatgataaagaaatgaaggaggaagacacttctttagttaacatg
tctactccagatccagatgcaaatggcttggaatcttacacaactctccctgaagctact
gaaaagtcacattttttcttagctactgcattagtaactgaatctataccagctgaacat
gtagtcacagattcaccaatcaaaaaggaagaaagtacaaaacattttcccaaaggcatg
agaccgacaattcaagagtcagatactgagctcttattctctggactgggatcaggagaa
gaagttttacctactctaccaacagagtcagtgaattttactgaagtggaacaaatcaat
aacacattatatccccacacttctcaagtggaaagtacctcaagtgacaaaactgaagac
tctaacagaatggaaaatgtggcaaaagaagttggaccactcgtatctcaaacagacatc
tttgaaggtagtgggtcagtaaccagcacaaccttaatagaaattttaagtgacactgga
gtagaaggacccacggtggcacctctccctttctccacggacatcggacatcttcaaaat
cagactcttaggtgggcagaagaaatccagactagtagaccacaaaccataactgaacaa
gactctaacaagaattcttcaacagcagaaattaacgaaacaacaacctcgtccactgat
tttctggctagagcttatggttttgaaatggccaaagaatttgttacatcagcaccaaaa
ccatctgacttgtattatgaaccttctggagaaggatctggagaagtggatattgttgat
tcatttcacacttctgcaactactcaggcaaccagacaagaaagcagcaccacatttttt
tctgatgggtccctggaaaaacatcctgaggtgccaagtgctaaagctgttactgctgat
ggattcccaacagtttcagtgatgctgcctcttcattcagagcagaacaaaatctcccct
ggtccaactagcacactgtcaaatacagtgtcatatgagaggtccacagatggtagtttc
caagaccgtttcagggaatttgaggattccaccttaaaacctaacagaaaaaaacccact
gaaaatattatcatagacctggacaaagaggacaaggatttaatattgacaattacagag
agtaccatccttgaaattctacctgagctgacatcggataaaaatactatcatagatatt
gatcatactaaacctgtatatgaagacattcttggaatgcaaacagatatagatccagag
gtaccatcagaaccacatgacagtaatgatgaaagtaaagatgacagcactcaagttcaa
gagacctatgaggcagctgtcaacctttctttaactgaggaaacatttgagggctctggt
gatgttctggctagctacactcaggcaacacatgatgaatcaatgacttatgaagataga
agccaactaggtcacatgggctttaacttcacaactgggatccctgctcctagcacagaa
acagaattagacattttacttcccacggcaacatccctgccaattcctcataagtctgcc
acagttattgcagagattgaaggaataaaagctgaagcaaaagccctggatgacatgttt
gaatcaagcactttgtctgatggtcaagctattgcagaccaaagtgaaataataccaaca
ttgggccaatttgaaaggactcaggagtatgaagacaaaaaacatgctggtccttctttt
cagccagaattctcttcaggagctgaggaggcattagtagatcatactccctatctaagt
attgctactacccaccttatggatcagagtttaacagaggtgcctaatgtgatggaagga
tccaatcccccatattacactgatacaacattagcagtttcagcatttgcaaagttgcct
tctcagacaccatcatctcctctcactctctactcaggcagtgaagcctctggacacaca
gagatcccccagcccagtgctctgccaggaatagatgtcagctcatctgtaatgtctcca
caggattcttttaaggaaattcatgtgaatattgaagcgactttcaaaccatcaagtgag
gaataccttcacgtaactaagcctccctctttatctcctgacacaaaattagaaccttca
gaagatgatggtaaacctgagtcattagaagaaacagaagcttctcccacagaacttatt
gctgtggaaggaactgagattctccaagatttccaaaacaaaaccgatggtcaagtttct
ggagaagcaatcaagatgttttccaccattaaaacacctgaggctggaactgttattaca
actgccgatgaaattaagttagaaggtgctacacagtggccacactctacttctgcttct
gccacctatggggtcgaggcaggtgtggtgccttggctgagtccacagacttctgagagg
cccacgctttcttcttctccagaaataaaccctgaaactcaagcagctttaatcagaggg
caggattccacaacagcaggatcagaacagcaagtggcagcgagaattcttgattccaat
aatcaggcaacagtaacccctgtggaatttaatactgaggttgcaacaccaccattttcc
cttctggagacttctaatgaaacagatttcctgattggcattaatgaagagtcagtggaa
ggcacggcaatctatttaccaggacctgatcgttgcaaaatgaacccgtgccttaacgga
ggcacctgttatcctactgaaacttcctatgtatgcacctgtgtgccaggatacagtgga
gaccaatgtgaacttgattttgatgaatgtcactctaatccctgtcgtaatggagccact
tgtgttgatggtttcaacacattcaggtgcctctgccttccaagttatgttggtgcactt
tgtgagcaagataccgagacatgtgactatggctggcacaaattccaagggcagtgctac
aaatactttgcccatcgacgcacatgggatgcagctgaacgggaatgccgtctgcagggc
gcccatctcacaagcatcctgtctcacgaagaacaaatgtttgttaatcgtgtgggccat
gattatcagtggataggcctcaatgacaagatgtttgagcatgacttccgttggaccgat
ggcagcacactgcaatacgagaattggagacccaaccagccagacagcttcttttctgct
ggagaagactgtgttgtaatcatttggcatgagaatggccagtggaatgatgttccctgc
aattatcatctcacctatacgtgcaagaaaggaacagttgcttgcggccagccccctgtt
gtagaaaatgccaagacctttggaaagatgaaacctcgttatgaaatcaactccctgatt
agataccactgcaaagatggtttcattcagcgtcaccttccaactatccggtgcctagga
aatggaagatgggctatacctaaaattacctgcatgaacccatctgcataccaaaggact
tattctatgaaatactttaaaaattcctcatcagcaaaggacaattcaataaatacatcc
aaacatgatcatcgttggagccggaggtggcaggagtcgaggcgctga |