KEGG   Pongo abelii (Sumatran orangutan): 100446999Help
Entry
100446999         CDS       T01416                                 

Gene name
LAMC1
Definition
laminin, gamma 1 (formerly LAMB2)
Orthology
K05635  
laminin, gamma 1
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Prion diseases
Toxoplasmosis
Amoebiasis
Pathways in cancer
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:pon00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100446999 (LAMC1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100446999 (LAMC1)
 Cellular Processes
  Cellular commiunity
   04510 Focal adhesion
    100446999 (LAMC1)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100446999 (LAMC1)
   05222 Small cell lung cancer
    100446999 (LAMC1)
  Neurodegenerative diseases
   05020 Prion diseases
    100446999 (LAMC1)
  Infectious diseases
   05146 Amoebiasis
    100446999 (LAMC1)
   05145 Toxoplasmosis
    100446999 (LAMC1)
Cell adhesion molecules and their ligands [BR:pon04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100446999 (LAMC1)
     Laminin-2 Extracellular matrix (ECM) components
      100446999 (LAMC1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
   VLA-3
      100446999 (LAMC1)
     Laminin-10 Extracellular matrix (ECM) components
      100446999 (LAMC1)
     Laminin-11 Extracellular matrix (ECM) components
      100446999 (LAMC1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
     Laminin-8 Extracellular matrix (ECM) components
      100446999 (LAMC1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
1
AA seq 1804 aa AA seqDB search
MCILSAWGRQGFQAAASLPWSLLAVSALEYSVTQQARKGGCQNPHNFESFKGKPRNTNNT
VEEFRSGSCRQEIASRNSSGCCDQALPILQGPCRPPERAGTSVREGLERGPGQQRALPGK
RGGGARGQWSASSAVLARGAHPSISPALAAATARAGVRPLGPQAQAAERPPGDAAGREEL
AGALAFAVTQRADGGMRGSHRAAPAVRPRGRLWPVLAVLAAAAAGCAQAAMDECTDEGGR
PQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFL
TDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRT
REDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEIQXHFSPSLGANVAFSTL
EGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGR
CKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCN
GRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCSPVGS
LSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSIDECNVETGRCVC
KDNVEGFNCERCKPGFFNLESSNPRGCTPCFCFGHSSVCTNAVGYSVYSISSTFQIDEDG
WRVEQRDGSEASLEWSSERQDIAVISDSYFPRYFIAPAKFLGKQLLSYGQNLSFSFRVDR
RDTRLSAEDLVLEGAGLRVSVPLIAQGNSYPSETTVKYVFRLHEAADYPWRPALTPFEFQ
KLLNNLTSIKIRGTYSERSAGYLDDVTLASARPGPGVPATWVESCTCPVGYGGQFCEMCL
SGYRRETPNLGPYSPCVLCACNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAG
TSSDCQPCPCPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLC
RLCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACN
CNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG
QCDIRTGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECRE
GFVGNRCDECEENYFYNRSWPGCQECPACYRLVKDKVADHRVKLQELESLIANLGTGDEM
VTDQAFEDRLKEAEREVMDLLREAQDVKDVDQNLMDRLQRVNNTLSSQISRLQNIRNTIE
ETGNLAEQARAHVENTERLIEIASRELEKAKVAAANVSVTQPESTGDPNNMTLLAEEARK
LAERHKQEADDIVRVAKTANDTSTEAYNLLLRTLAGENQTAFEIEKLNRKYEQVKNISQD
LEKQAARVHEEAKRAGDKAVEIYASVAQLSPLDSETLENEANNIKMEAENLEHLIDQKLK
DYEDLREDMRGKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGRDTLQEAND
ILNNLKDFDRRVNDNKTAAEEALRKIPAINQTIIEANEKTREAQQALGNAAADATEAKNK
AHEAERIASAVQKNATSTKAEAERTFAEVTDLDNEVNSMLKQLQEAEKELKRKQDDADQD
MMMAGMASQAAQEAEINARKAKNSVTSLLSIINDLLEQLGQLDTVDLNKLNEIEGTLNKA
KDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKDIRNLEDIRKTLPSGCFNTPS
IEKP
NT seq 5415 nt NT seq  +upstreamnt  +downstreamnt
atgtgcatcctctctgcttggggacgccaagggtttcaagctgctgcctccctgccctgg
tctctgcttgccgtatcagcactggaatattccgtgactcagcaggcccgaaaaggagga
tgtcagaatccacataatttcgagtcttttaaaggcaagccgaggaacacaaacaacaca
gtggaagaatttcgcagtgggtcgtgccggcaggaaatcgcttcacgaaactcatctggc
tgctgcgaccaggcccttccgattctccagggaccgtgtcggccccctgaacgcgccggg
acctctgttcgggaggggctggagcggggccccgggcagcagcgggcgctcccggggaag
cgcggaggcggcgcgcgggggcagtggtcggctagcagcgcggtcctcgctaggggcgcc
cacccgtcaatctctcctgcactagccgccgccaccgcccgcgccggagtcaggcccctg
ggcccccaggctcaagcagcggagcggcctccgggggacgccgctgggcgagaggaactc
gccggtgcccttgccttcgccgtgacccagcgtgcggacggcgggatgagggggagccat
cgggccgcgccggccgtgcgaccccgggggcggctctggcccgtgctggccgtgctggcg
gccgccgcggcgggctgtgcccaggcagccatggacgagtgcacggacgagggcgggcgg
ccgcagcgctgcatgcccgagttcgtcaacgccgccttcaacgtgactgtggtggccacc
aacacgtgtgggactccgcccgaggaatactgtgtgcagaccggggtgaccggggtcacc
aagtcctgtcacctgtgcgacgccgggcagccccacctgcagcacggggcagccttcctg
accgactacaacaaccaggccgacaccacctggtggcaaagccagaccatgctggccggg
gtgcagtaccccagctccatcaacctcacgctgcacctgggaaaagcttttgacatcacc
tatgtgcgtctcaagttccacaccagccgcccagagagctttgccatttacaagcgcaca
agggaagatgggccctggattccttaccagtactacagtggttcctgcgagaacacctac
tccaaggcaaaccgcggcttcatcaggacaggaggggacgagcagcaggccttgtgtact
gatgaaattcagtgacatttctccccttcactgggggcaaatgtggccttttctaccctg
gaaggaaggcccagcgcctataactttgacaatagccctgtgctgcaggaatgggtaact
gccactgacatcagagtaactcttaatcgcctgaacacttttggagatgaagtgtttaac
gatcccaaagttctcaagtcctattattatgcgatctctgattttgctgtgggtggcaga
tgtaaatgtaatggacatgcaagcgagtgtatgaagaacgaatttgataagctggtgtgt
aattgcaaacataacacatatggagtagactgtgaaaagtgtcttcctttcttcaatgac
cggccgtggaggagggcaactgcagaaagtgccagtgaatgcctgccctgtgactgcaat
ggtcgatcccaggaatgctacttcgatcctgaactctatcgttccactggccatgggggc
cactgtaccaactgccaggataacacagatggcgcccactgtgagaggtgccgggagaac
ttcttccgccttggaaacaatgaagcctgctctccatgccactgtagtcctgtgggctct
ctaagcacacagtgtgatagttatggcagatgcagctgtaagccaggagtgatgggggac
aaatgtgaccgttgccagcctggattccattctctcactgaagcaggatgcaggccatgc
tcttgtgatccctctggcagcatagatgaatgtaatgttgaaacaggaagatgtgtttgc
aaagacaatgtcgaaggcttcaattgtgaaagatgcaaacctggattttttaatctggaa
tcatctaatcctcggggttgcacaccctgcttctgctttgggcattcttctgtctgtaca
aatgctgttggctacagtgtttattctatctcctctacctttcagattgatgaggatggg
tggcgtgtggaacagagagatggctctgaagcatctctcgagtggtcctctgagaggcaa
gatatcgctgtgatctcagacagctactttcctcggtacttcattgctcctgcaaagttc
ttgggcaagcagttgttgagttatggtcagaacctctccttctcctttcgagtggacagg
cgcgatactcgcctctctgcagaagaccttgtgcttgagggagctggcttaagagtatcg
gtacccttgatcgctcagggcaattcctatccaagtgagaccactgtgaagtatgtcttc
aggctccatgaagcagcagattacccttggaggcctgctcttaccccttttgaatttcag
aagctcctaaacaacttgacctctatcaagatccgtgggacatacagtgagagaagtgct
ggatatttggatgatgtcaccctggcaagtgctcgtcctgggcctggagttcctgcaact
tgggtggagtcctgcacctgtcctgtgggatatggagggcagttttgtgagatgtgtctc
tcaggttacagaagagaaactcctaatcttggaccatacagtccatgtgtgctttgcgcc
tgcaatggacacagcgagacctgtgatcctgagacaggtgtttgtaactgcagagacaat
acagctggcccgcactgtgagaagtgcagtgatgggtactatggagattcaactgcgggc
acctcctccgattgccaaccctgtccgtgtcctggaggttcaagttgtgctgttgtcccc
aagacaaaggaggtggtgtgcaccaactgtcctactggcaccactggtaagagatgtgag
ctctgtgatgatggctactttggagaccccctgggtagaaacggccctgtgagactttgc
cgtctgtgccagtgcaatgacaacatcgatcccaacgcagttggaaattgcaatcgcttg
acaggagaatgcctgaagtgcatctataacactgctggcttctattgtgaccggtgcaaa
gacggattttttggaaatcctctggctcccaatccagcagacaaatgcaaagcctgcaat
tgcaatccatatgggacagtgaagcagcagagcagctgtaaccccgtgacggggcaatgt
gaatgtttgcctcacgtgactggccgggactgtggtgcctgtgaccctggattctacaat
ctgcagagtgggcaaggctgtgaaaggtgtgactgccatgccttgggctccaccaatggg
cagtgtgacatccgcaccggccagtgtgagtgccagcccggcatcaccggtcagcactgt
gagcgctgtgaggtcaaccactttgggtttggacctgaaggctgcaaaccctgtgactgt
catcccgagggatctctctcacttcagtgcaaagatgatggtcgctgtgaatgcagagaa
ggctttgtgggaaatcgctgtgacgagtgtgaagaaaactatttctacaatcggtcttgg
cctggctgccaggaatgtccagcttgttaccggctggtaaaggataaggttgctgatcat
agagtgaagctccaggaattagagagtcttatagcaaaccttggaactggggatgagatg
gtgacagatcaagccttcgaggatagactaaaggaagcagagagggaagttatggacctc
cttcgtgaggcccaggatgtcaaagatgttgaccagaatttgatggatcgcctacagaga
gtgaataacactctgtccagccaaattagccgtttacagaatatccggaataccattgaa
gagactggaaacttggctgaacaagcacgtgcccatgtagagaacacagagcggttgatt
gaaatcgcatccagagaacttgagaaagcaaaagtcgctgctgccaatgtgtcagtcact
cagccagaatctaccggggacccaaacaacatgactcttttggcagaagaggctcgaaag
cttgctgaacgtcataaacaggaagctgatgacattgttcgagtggcaaagacagccaat
gatacatcaactgaggcatacaacctgcttttgaggacactggcaggagaaaatcaaaca
gcatttgagattgaaaagcttaataggaagtatgaacaagtgaagaacatctcacaggat
ctggaaaaacaagctgcccgagtacatgaggaggccaaaagggctggtgacaaagctgtg
gagatctatgccagcgtggctcagctgagccctttggactctgagacactggagaatgaa
gcaaataacataaagatggaagctgagaatctggaacatctgattgatcagaaattaaaa
gattatgaggacctcagagaagatatgagagggaaggaacttgaagtcaagaaccttctg
gagaaaggcaagactgaacagcagaccgcagaccaactcctagcccgagctgatgctgcc
aaggccctcgctgaagaagctgcaaagaagggacgggataccttacaagaagctaatgac
attctcaacaacctgaaagattttgataggcgcgtgaacgataacaagacggccgcagag
gaggcgctaaggaagattcctgccatcaaccagaccatcattgaagctaatgaaaagacc
agggaagcccagcaggccctgggcaatgctgcagcggatgccacagaggccaaaaacaag
gcccatgaggcggagaggatcgcgagcgctgtccaaaagaatgccaccagcaccaaggca
gaagctgaaagaacttttgcagaagttacagatctggataatgaggtgaacagtatgttg
aagcaactacaggaagcagaaaaagagctaaagagaaaacaagatgacgctgaccaggac
atgatgatggcagggatggcttcacaggctgctcaagaagccgagatcaatgccagaaaa
gccaaaaactctgttactagcctcctcagcattattaatgacctcttggagcagctgggg
cagctggatacagtggacctaaataagctaaacgagattgaaggcaccctaaacaaagcc
aaagatgaaatgaaggtcagcgatcttgataggaaagtgtctgacctggagaatgaagcc
aagaagcaggaggctgccatcatggactacaaccgagatatcgaggagatcatgaaggac
attcgcaatctggaggacatcaggaagaccttaccatctggctgcttcaacaccccgtcc
attgaaaagccctag

DBGET integrated database retrieval system