KEGG   Pongo abelii (Sumatran orangutan): 100446999Help
Entry
100446999         CDS       T01416                                 

Gene name
LAMC1
Definition
laminin, gamma 1 (formerly LAMB2)
Orthology
K05635  
laminin, gamma 1
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Prion diseases
Toxoplasmosis
Amoebiasis
Pathways in cancer
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:pon00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100446999 (LAMC1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100446999 (LAMC1)
 Cellular Processes
  Cellular commiunity
   04510 Focal adhesion
    100446999 (LAMC1)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100446999 (LAMC1)
   05222 Small cell lung cancer
    100446999 (LAMC1)
  Neurodegenerative diseases
   05020 Prion diseases
    100446999 (LAMC1)
  Infectious diseases
   05146 Amoebiasis
    100446999 (LAMC1)
   05145 Toxoplasmosis
    100446999 (LAMC1)
Cell adhesion molecules and their ligands [BR:pon04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100446999 (LAMC1)
     Laminin-2 Extracellular matrix (ECM) components
      100446999 (LAMC1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
   VLA-3
      100446999 (LAMC1)
     Laminin-10 Extracellular matrix (ECM) components
      100446999 (LAMC1)
     Laminin-11 Extracellular matrix (ECM) components
      100446999 (LAMC1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
     Laminin-8 Extracellular matrix (ECM) components
      100446999 (LAMC1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100446999 (LAMC1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
1
AA seq 1609 aa AA seqDB search
MRGSHRAAPAVRPRGRLWPVLAVLAAAAAGCAQAAMDECTDEGGRPQRCMPEFVNAAFNV
TVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFLTDYNNQADTTWWQSQ
TMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGS
CENTYSKANRGFIRTGGDEQQALCTDEIQXHFSPSLGANVAFSTLEGRPSAYNFDNSPVL
QEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECMKNEF
DKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRS
TGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKP
GVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSIDECNVETGRCVCKDNVEGFNCERCKPG
FFNLESSNPRGCTPCFCFGHSSVCTNAVGYSVYSISSTFQIDEDGWRVEQRDGSEASLEW
SSERQDIAVISDSYFPRYFIAPAKFLGKQLLSYGQNLSFSFRVDRRDTRLSAEDLVLEGA
GLRVSVPLIAQGNSYPSETTVKYVFRLHEAADYPWRPALTPFEFQKLLNNLTSIKIRGTY
SERSAGYLDDVTLASARPGPGVPATWVESCTCPVGYGGQFCEMCLSGYRRETPNLGPYSP
CVLCACNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSS
CAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVG
NCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACNCNPYGTVKQQSSCNP
VTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNGQCDIRTGQCECQPGI
TGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECREGFVGNRCDECEENYF
YNRSWPGCQECPACYRLVKDKVADHRVKLQELESLIANLGTGDEMVTDQAFEDRLKEAER
EVMDLLREAQDVKDVDQNLMDRLQRVNNTLSSQISRLQNIRNTIEETGNLAEQARAHVEN
TERLIEIASRELEKAKVAAANVSVTQPESTGDPNNMTLLAEEARKLAERHKQEADDIVRV
AKTANDTSTEAYNLLLRTLAGENQTAFEIEKLNRKYEQVKNISQDLEKQAARVHEEAKRA
GDKAVEIYASVAQLSPLDSETLENEANNIKMEAENLEHLIDQKLKDYEDLREDMRGKELE
VKNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGRDTLQEANDILNNLKDFDRRVNDN
KTAAEEALRKIPAINQTIIEANEKTREAQQALGNAAADATEAKNKAHEAERIASAVQKNA
TSTKAEAERTFAEVTDLDNEVNSMLKQLQEAEKELKRKQDDADQDMMMAGMASQAAQEAE
INARKAKNSVTSLLSIINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKVSDLDRKVSD
LENEAKKQEAAIMDYNRDIEEIMKDIRNLEDIRKTLPSGCFNTPSIEKP
NT seq 4830 nt NT seq  +upstreamnt  +downstreamnt
atgagggggagccatcgggccgcgccggccgtgcgaccccgggggcggctctggcccgtg
ctggccgtgctggcggccgccgcggcgggctgtgcccaggcagccatggacgagtgcacg
gacgagggcgggcggccgcagcgctgcatgcccgagttcgtcaacgccgccttcaacgtg
actgtggtggccaccaacacgtgtgggactccgcccgaggaatactgtgtgcagaccggg
gtgaccggggtcaccaagtcctgtcacctgtgcgacgccgggcagccccacctgcagcac
ggggcagccttcctgaccgactacaacaaccaggccgacaccacctggtggcaaagccag
accatgctggccggggtgcagtaccccagctccatcaacctcacgctgcacctgggaaaa
gcttttgacatcacctatgtgcgtctcaagttccacaccagccgcccagagagctttgcc
atttacaagcgcacaagggaagatgggccctggattccttaccagtactacagtggttcc
tgcgagaacacctactccaaggcaaaccgcggcttcatcaggacaggaggggacgagcag
caggccttgtgtactgatgaaattcagtgacatttctccccttcactgggggcaaatgtg
gccttttctaccctggaaggaaggcccagcgcctataactttgacaatagccctgtgctg
caggaatgggtaactgccactgacatcagagtaactcttaatcgcctgaacacttttgga
gatgaagtgtttaacgatcccaaagttctcaagtcctattattatgcgatctctgatttt
gctgtgggtggcagatgtaaatgtaatggacatgcaagcgagtgtatgaagaacgaattt
gataagctggtgtgtaattgcaaacataacacatatggagtagactgtgaaaagtgtctt
cctttcttcaatgaccggccgtggaggagggcaactgcagaaagtgccagtgaatgcctg
ccctgtgactgcaatggtcgatcccaggaatgctacttcgatcctgaactctatcgttcc
actggccatgggggccactgtaccaactgccaggataacacagatggcgcccactgtgag
aggtgccgggagaacttcttccgccttggaaacaatgaagcctgctctccatgccactgt
agtcctgtgggctctctaagcacacagtgtgatagttatggcagatgcagctgtaagcca
ggagtgatgggggacaaatgtgaccgttgccagcctggattccattctctcactgaagca
ggatgcaggccatgctcttgtgatccctctggcagcatagatgaatgtaatgttgaaaca
ggaagatgtgtttgcaaagacaatgtcgaaggcttcaattgtgaaagatgcaaacctgga
ttttttaatctggaatcatctaatcctcggggttgcacaccctgcttctgctttgggcat
tcttctgtctgtacaaatgctgttggctacagtgtttattctatctcctctacctttcag
attgatgaggatgggtggcgtgtggaacagagagatggctctgaagcatctctcgagtgg
tcctctgagaggcaagatatcgctgtgatctcagacagctactttcctcggtacttcatt
gctcctgcaaagttcttgggcaagcagttgttgagttatggtcagaacctctccttctcc
tttcgagtggacaggcgcgatactcgcctctctgcagaagaccttgtgcttgagggagct
ggcttaagagtatcggtacccttgatcgctcagggcaattcctatccaagtgagaccact
gtgaagtatgtcttcaggctccatgaagcagcagattacccttggaggcctgctcttacc
ccttttgaatttcagaagctcctaaacaacttgacctctatcaagatccgtgggacatac
agtgagagaagtgctggatatttggatgatgtcaccctggcaagtgctcgtcctgggcct
ggagttcctgcaacttgggtggagtcctgcacctgtcctgtgggatatggagggcagttt
tgtgagatgtgtctctcaggttacagaagagaaactcctaatcttggaccatacagtcca
tgtgtgctttgcgcctgcaatggacacagcgagacctgtgatcctgagacaggtgtttgt
aactgcagagacaatacagctggcccgcactgtgagaagtgcagtgatgggtactatgga
gattcaactgcgggcacctcctccgattgccaaccctgtccgtgtcctggaggttcaagt
tgtgctgttgtccccaagacaaaggaggtggtgtgcaccaactgtcctactggcaccact
ggtaagagatgtgagctctgtgatgatggctactttggagaccccctgggtagaaacggc
cctgtgagactttgccgtctgtgccagtgcaatgacaacatcgatcccaacgcagttgga
aattgcaatcgcttgacaggagaatgcctgaagtgcatctataacactgctggcttctat
tgtgaccggtgcaaagacggattttttggaaatcctctggctcccaatccagcagacaaa
tgcaaagcctgcaattgcaatccatatgggacagtgaagcagcagagcagctgtaacccc
gtgacggggcaatgtgaatgtttgcctcacgtgactggccgggactgtggtgcctgtgac
cctggattctacaatctgcagagtgggcaaggctgtgaaaggtgtgactgccatgccttg
ggctccaccaatgggcagtgtgacatccgcaccggccagtgtgagtgccagcccggcatc
accggtcagcactgtgagcgctgtgaggtcaaccactttgggtttggacctgaaggctgc
aaaccctgtgactgtcatcccgagggatctctctcacttcagtgcaaagatgatggtcgc
tgtgaatgcagagaaggctttgtgggaaatcgctgtgacgagtgtgaagaaaactatttc
tacaatcggtcttggcctggctgccaggaatgtccagcttgttaccggctggtaaaggat
aaggttgctgatcatagagtgaagctccaggaattagagagtcttatagcaaaccttgga
actggggatgagatggtgacagatcaagccttcgaggatagactaaaggaagcagagagg
gaagttatggacctccttcgtgaggcccaggatgtcaaagatgttgaccagaatttgatg
gatcgcctacagagagtgaataacactctgtccagccaaattagccgtttacagaatatc
cggaataccattgaagagactggaaacttggctgaacaagcacgtgcccatgtagagaac
acagagcggttgattgaaatcgcatccagagaacttgagaaagcaaaagtcgctgctgcc
aatgtgtcagtcactcagccagaatctaccggggacccaaacaacatgactcttttggca
gaagaggctcgaaagcttgctgaacgtcataaacaggaagctgatgacattgttcgagtg
gcaaagacagccaatgatacatcaactgaggcatacaacctgcttttgaggacactggca
ggagaaaatcaaacagcatttgagattgaaaagcttaataggaagtatgaacaagtgaag
aacatctcacaggatctggaaaaacaagctgcccgagtacatgaggaggccaaaagggct
ggtgacaaagctgtggagatctatgccagcgtggctcagctgagccctttggactctgag
acactggagaatgaagcaaataacataaagatggaagctgagaatctggaacatctgatt
gatcagaaattaaaagattatgaggacctcagagaagatatgagagggaaggaacttgaa
gtcaagaaccttctggagaaaggcaagactgaacagcagaccgcagaccaactcctagcc
cgagctgatgctgccaaggccctcgctgaagaagctgcaaagaagggacgggatacctta
caagaagctaatgacattctcaacaacctgaaagattttgataggcgcgtgaacgataac
aagacggccgcagaggaggcgctaaggaagattcctgccatcaaccagaccatcattgaa
gctaatgaaaagaccagggaagcccagcaggccctgggcaatgctgcagcggatgccaca
gaggccaaaaacaaggcccatgaggcggagaggatcgcgagcgctgtccaaaagaatgcc
accagcaccaaggcagaagctgaaagaacttttgcagaagttacagatctggataatgag
gtgaacagtatgttgaagcaactacaggaagcagaaaaagagctaaagagaaaacaagat
gacgctgaccaggacatgatgatggcagggatggcttcacaggctgctcaagaagccgag
atcaatgccagaaaagccaaaaactctgttactagcctcctcagcattattaatgacctc
ttggagcagctggggcagctggatacagtggacctaaataagctaaacgagattgaaggc
accctaaacaaagccaaagatgaaatgaaggtcagcgatcttgataggaaagtgtctgac
ctggagaatgaagccaagaagcaggaggctgccatcatggactacaaccgagatatcgag
gagatcatgaaggacattcgcaatctggaggacatcaggaagaccttaccatctggctgc
ttcaacaccccgtccattgaaaagccctag

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