KEGG T01416: 100446999

Pongo abelii (Sumatran orangutan): 100446999

Entry

100446999 CDS T01416

Gene name

LAMC1

Definition

laminin, gamma 1 (formerly LAMB2)

Orthology

K05635

laminin, gamma 1

Organism

pon Pongo abelii (Sumatran orangutan)

Pathway

pon04151	PI3K-Akt signaling pathway
pon04510	Focal adhesion
pon04512	ECM-receptor interaction
pon05020	Prion diseases
pon05145	Toxoplasmosis
pon05146	Amoebiasis
pon05200	Pathways in cancer
pon05222	Small cell lung cancer

Class

Environmental Information Processing; Signal transduction; PI3K-Akt signaling pathway [PATH:pon04151]
Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:pon04512]
Cellular Processes; Cell communication; Focal adhesion [PATH:pon04510]
Human Diseases; Cancers; Pathways in cancer [PATH:pon05200]
Human Diseases; Cancers; Small cell lung cancer [PATH:pon05222]
Human Diseases; Neurodegenerative diseases; Prion diseases [PATH:pon05020]
Human Diseases; Infectious diseases; Amoebiasis [PATH:pon05146]
Human Diseases; Infectious diseases; Toxoplasmosis [PATH:pon05145]

SSDB

Motif

Pfam:

Laminin_N Laminin_EGF Laminin_B

Other DBs

NCBI-GI:

395729310

NCBI-GeneID:

100446999

Position

AA seq 1804 aa
MCILSAWGRQGFQAAASLPWSLLAVSALEYSVTQQARKGGCQNPHNFESFKGKPRNTNNT
VEEFRSGSCRQEIASRNSSGCCDQALPILQGPCRPPERAGTSVREGLERGPGQQRALPGK
RGGGARGQWSASSAVLARGAHPSISPALAAATARAGVRPLGPQAQAAERPPGDAAGREEL
AGALAFAVTQRADGGMRGSHRAAPAVRPRGRLWPVLAVLAAAAAGCAQAAMDECTDEGGR
PQRCMPEFVNAAFNVTVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFL
TDYNNQADTTWWQSQTMLAGVQYPSSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRT
REDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEIQXHFSPSLGANVAFSTL
EGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGR
CKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCN
GRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENFFRLGNNEACSPCHCSPVGS
LSTQCDSYGRCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSIDECNVETGRCVC
KDNVEGFNCERCKPGFFNLESSNPRGCTPCFCFGHSSVCTNAVGYSVYSISSTFQIDEDG
WRVEQRDGSEASLEWSSERQDIAVISDSYFPRYFIAPAKFLGKQLLSYGQNLSFSFRVDR
RDTRLSAEDLVLEGAGLRVSVPLIAQGNSYPSETTVKYVFRLHEAADYPWRPALTPFEFQ
KLLNNLTSIKIRGTYSERSAGYLDDVTLASARPGPGVPATWVESCTCPVGYGGQFCEMCL
SGYRRETPNLGPYSPCVLCACNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAG
TSSDCQPCPCPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLC
RLCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACN
CNPYGTVKQQSSCNPVTGQCECLPHVTGRDCGACDPGFYNLQSGQGCERCDCHALGSTNG
QCDIRTGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDCHPEGSLSLQCKDDGRCECRE
GFVGNRCDECEENYFYNRSWPGCQECPACYRLVKDKVADHRVKLQELESLIANLGTGDEM
VTDQAFEDRLKEAEREVMDLLREAQDVKDVDQNLMDRLQRVNNTLSSQISRLQNIRNTIE
ETGNLAEQARAHVENTERLIEIASRELEKAKVAAANVSVTQPESTGDPNNMTLLAEEARK
LAERHKQEADDIVRVAKTANDTSTEAYNLLLRTLAGENQTAFEIEKLNRKYEQVKNISQD
LEKQAARVHEEAKRAGDKAVEIYASVAQLSPLDSETLENEANNIKMEAENLEHLIDQKLK
DYEDLREDMRGKELEVKNLLEKGKTEQQTADQLLARADAAKALAEEAAKKGRDTLQEAND
ILNNLKDFDRRVNDNKTAAEEALRKIPAINQTIIEANEKTREAQQALGNAAADATEAKNK
AHEAERIASAVQKNATSTKAEAERTFAEVTDLDNEVNSMLKQLQEAEKELKRKQDDADQD
MMMAGMASQAAQEAEINARKAKNSVTSLLSIINDLLEQLGQLDTVDLNKLNEIEGTLNKA
KDEMKVSDLDRKVSDLENEAKKQEAAIMDYNRDIEEIMKDIRNLEDIRKTLPSGCFNTPS
IEKP

NT seq 5415 nt +upstreamnt +downstreamnt
atgtgcatcctctctgcttggggacgccaagggtttcaagctgctgcctccctgccctgg
tctctgcttgccgtatcagcactggaatattccgtgactcagcaggcccgaaaaggagga
tgtcagaatccacataatttcgagtcttttaaaggcaagccgaggaacacaaacaacaca
gtggaagaatttcgcagtgggtcgtgccggcaggaaatcgcttcacgaaactcatctggc
tgctgcgaccaggcccttccgattctccagggaccgtgtcggccccctgaacgcgccggg
acctctgttcgggaggggctggagcggggccccgggcagcagcgggcgctcccggggaag
cgcggaggcggcgcgcgggggcagtggtcggctagcagcgcggtcctcgctaggggcgcc
cacccgtcaatctctcctgcactagccgccgccaccgcccgcgccggagtcaggcccctg
ggcccccaggctcaagcagcggagcggcctccgggggacgccgctgggcgagaggaactc
gccggtgcccttgccttcgccgtgacccagcgtgcggacggcgggatgagggggagccat
cgggccgcgccggccgtgcgaccccgggggcggctctggcccgtgctggccgtgctggcg
gccgccgcggcgggctgtgcccaggcagccatggacgagtgcacggacgagggcgggcgg
ccgcagcgctgcatgcccgagttcgtcaacgccgccttcaacgtgactgtggtggccacc
aacacgtgtgggactccgcccgaggaatactgtgtgcagaccggggtgaccggggtcacc
aagtcctgtcacctgtgcgacgccgggcagccccacctgcagcacggggcagccttcctg
accgactacaacaaccaggccgacaccacctggtggcaaagccagaccatgctggccggg
gtgcagtaccccagctccatcaacctcacgctgcacctgggaaaagcttttgacatcacc
tatgtgcgtctcaagttccacaccagccgcccagagagctttgccatttacaagcgcaca
agggaagatgggccctggattccttaccagtactacagtggttcctgcgagaacacctac
tccaaggcaaaccgcggcttcatcaggacaggaggggacgagcagcaggccttgtgtact
gatgaaattcagtgacatttctccccttcactgggggcaaatgtggccttttctaccctg
gaaggaaggcccagcgcctataactttgacaatagccctgtgctgcaggaatgggtaact
gccactgacatcagagtaactcttaatcgcctgaacacttttggagatgaagtgtttaac
gatcccaaagttctcaagtcctattattatgcgatctctgattttgctgtgggtggcaga
tgtaaatgtaatggacatgcaagcgagtgtatgaagaacgaatttgataagctggtgtgt
aattgcaaacataacacatatggagtagactgtgaaaagtgtcttcctttcttcaatgac
cggccgtggaggagggcaactgcagaaagtgccagtgaatgcctgccctgtgactgcaat
ggtcgatcccaggaatgctacttcgatcctgaactctatcgttccactggccatgggggc
cactgtaccaactgccaggataacacagatggcgcccactgtgagaggtgccgggagaac
ttcttccgccttggaaacaatgaagcctgctctccatgccactgtagtcctgtgggctct
ctaagcacacagtgtgatagttatggcagatgcagctgtaagccaggagtgatgggggac
aaatgtgaccgttgccagcctggattccattctctcactgaagcaggatgcaggccatgc
tcttgtgatccctctggcagcatagatgaatgtaatgttgaaacaggaagatgtgtttgc
aaagacaatgtcgaaggcttcaattgtgaaagatgcaaacctggattttttaatctggaa
tcatctaatcctcggggttgcacaccctgcttctgctttgggcattcttctgtctgtaca
aatgctgttggctacagtgtttattctatctcctctacctttcagattgatgaggatggg
tggcgtgtggaacagagagatggctctgaagcatctctcgagtggtcctctgagaggcaa
gatatcgctgtgatctcagacagctactttcctcggtacttcattgctcctgcaaagttc
ttgggcaagcagttgttgagttatggtcagaacctctccttctcctttcgagtggacagg
cgcgatactcgcctctctgcagaagaccttgtgcttgagggagctggcttaagagtatcg
gtacccttgatcgctcagggcaattcctatccaagtgagaccactgtgaagtatgtcttc
aggctccatgaagcagcagattacccttggaggcctgctcttaccccttttgaatttcag
aagctcctaaacaacttgacctctatcaagatccgtgggacatacagtgagagaagtgct
ggatatttggatgatgtcaccctggcaagtgctcgtcctgggcctggagttcctgcaact
tgggtggagtcctgcacctgtcctgtgggatatggagggcagttttgtgagatgtgtctc
tcaggttacagaagagaaactcctaatcttggaccatacagtccatgtgtgctttgcgcc
tgcaatggacacagcgagacctgtgatcctgagacaggtgtttgtaactgcagagacaat
acagctggcccgcactgtgagaagtgcagtgatgggtactatggagattcaactgcgggc
acctcctccgattgccaaccctgtccgtgtcctggaggttcaagttgtgctgttgtcccc
aagacaaaggaggtggtgtgcaccaactgtcctactggcaccactggtaagagatgtgag
ctctgtgatgatggctactttggagaccccctgggtagaaacggccctgtgagactttgc
cgtctgtgccagtgcaatgacaacatcgatcccaacgcagttggaaattgcaatcgcttg
acaggagaatgcctgaagtgcatctataacactgctggcttctattgtgaccggtgcaaa
gacggattttttggaaatcctctggctcccaatccagcagacaaatgcaaagcctgcaat
tgcaatccatatgggacagtgaagcagcagagcagctgtaaccccgtgacggggcaatgt
gaatgtttgcctcacgtgactggccgggactgtggtgcctgtgaccctggattctacaat
ctgcagagtgggcaaggctgtgaaaggtgtgactgccatgccttgggctccaccaatggg
cagtgtgacatccgcaccggccagtgtgagtgccagcccggcatcaccggtcagcactgt
gagcgctgtgaggtcaaccactttgggtttggacctgaaggctgcaaaccctgtgactgt
catcccgagggatctctctcacttcagtgcaaagatgatggtcgctgtgaatgcagagaa
ggctttgtgggaaatcgctgtgacgagtgtgaagaaaactatttctacaatcggtcttgg
cctggctgccaggaatgtccagcttgttaccggctggtaaaggataaggttgctgatcat
agagtgaagctccaggaattagagagtcttatagcaaaccttggaactggggatgagatg
gtgacagatcaagccttcgaggatagactaaaggaagcagagagggaagttatggacctc
cttcgtgaggcccaggatgtcaaagatgttgaccagaatttgatggatcgcctacagaga
gtgaataacactctgtccagccaaattagccgtttacagaatatccggaataccattgaa
gagactggaaacttggctgaacaagcacgtgcccatgtagagaacacagagcggttgatt
gaaatcgcatccagagaacttgagaaagcaaaagtcgctgctgccaatgtgtcagtcact
cagccagaatctaccggggacccaaacaacatgactcttttggcagaagaggctcgaaag
cttgctgaacgtcataaacaggaagctgatgacattgttcgagtggcaaagacagccaat
gatacatcaactgaggcatacaacctgcttttgaggacactggcaggagaaaatcaaaca
gcatttgagattgaaaagcttaataggaagtatgaacaagtgaagaacatctcacaggat
ctggaaaaacaagctgcccgagtacatgaggaggccaaaagggctggtgacaaagctgtg
gagatctatgccagcgtggctcagctgagccctttggactctgagacactggagaatgaa
gcaaataacataaagatggaagctgagaatctggaacatctgattgatcagaaattaaaa
gattatgaggacctcagagaagatatgagagggaaggaacttgaagtcaagaaccttctg
gagaaaggcaagactgaacagcagaccgcagaccaactcctagcccgagctgatgctgcc
aaggccctcgctgaagaagctgcaaagaagggacgggataccttacaagaagctaatgac
attctcaacaacctgaaagattttgataggcgcgtgaacgataacaagacggccgcagag
gaggcgctaaggaagattcctgccatcaaccagaccatcattgaagctaatgaaaagacc
agggaagcccagcaggccctgggcaatgctgcagcggatgccacagaggccaaaaacaag
gcccatgaggcggagaggatcgcgagcgctgtccaaaagaatgccaccagcaccaaggca
gaagctgaaagaacttttgcagaagttacagatctggataatgaggtgaacagtatgttg
aagcaactacaggaagcagaaaaagagctaaagagaaaacaagatgacgctgaccaggac
atgatgatggcagggatggcttcacaggctgctcaagaagccgagatcaatgccagaaaa
gccaaaaactctgttactagcctcctcagcattattaatgacctcttggagcagctgggg
cagctggatacagtggacctaaataagctaaacgagattgaaggcaccctaaacaaagcc
aaagatgaaatgaaggtcagcgatcttgataggaaagtgtctgacctggagaatgaagcc
aagaagcaggaggctgccatcatggactacaaccgagatatcgaggagatcatgaaggac
attcgcaatctggaggacatcaggaagaccttaccatctggctgcttcaacaccccgtcc
attgaaaagccctag

All links

Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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