KEGG   Pongo abelii (Sumatran orangutan): 100452811
Entry
100452811         CDS       T01416                                 
Symbol
TREX1
Name
(RefSeq) three-prime repair exonuclease 1
  KO
K10790  three prime repair exonuclease 1 [EC:3.1.11.2]
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:pon00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100452811 (TREX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pon03400]
    100452811 (TREX1)
Enzymes [BR:pon01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     100452811 (TREX1)
DNA repair and recombination proteins [BR:pon03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    100452811 (TREX1)
SSDB
Motif
Pfam: RNase_T DUF6703 Herpesvir_UL11
Other DBs
NCBI-GeneID: 100452811
NCBI-ProteinID: XP_002813830
Ensembl: ENSPPYG00000013903
UniProt: H2PAU7
Position
3:complement(93422659..93424629)
AA seq 314 aa
MGSQALPPGPMQTLIFFDMEATGLPFSQPKVTELCLLAVHRCALESPPISQGPPPTVPPP
PRVVDKLSLCVAPGKACSPAASEITGLSTAVLAAHGRQCFDDNLANLLLAFLRRQPQPWC
LVAHNGDRYDFPLLQAELALLGLTSALDGAFCVDSITALKALERASSPSEHGPRKSYSLG
SIYTRLYGQSPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFGTIRPMYGVTASAR
TKPRPSAVTTTAHLATTRNTSPSLGESRRPKDLPPVKDLGALPREGLLAPLGLLAILTLA
VATLYGLSLATPGE
NT seq 945 nt   +upstreamnt  +downstreamnt
atgggctcgcaagccctgcccccggggcccatgcagaccctcatctttttcgacatggag
gccactggcttgcccttctcccagcccaaggtcacggagctgtgcctgctggctgtccac
agatgtgccctggagagcccccccatctctcaggggccacctcccacagttcctccacca
ccacgtgtggtggacaagctctccctgtgtgtggctccggggaaggcctgcagccctgca
gccagcgagatcacaggtctgagcacagctgtgctggcagcgcatgggcgtcaatgtttc
gatgacaacttggccaacctgctcctagccttcctgcggcgccagccacagccctggtgc
ctggtggcacacaatggtgaccgctacgacttccccctgctccaagcagagctggctctg
ctgggcctcaccagtgctctggatggtgccttctgtgtggatagcatcactgcactgaag
gccctggagcgagcaagcagcccctcagaacacggcccaaggaagagctacagcctaggc
agcatctacacacgcctgtatgggcagtcccctccagactcgcacacggctgagggtgac
gtcctggccctgctcagcatctgtcagtggagaccacaggccctgctgcggtgggtggat
gctcacgccaggcccttcggcaccatcagacccatgtatggggtcacagcctctgctagg
accaagccaagaccatctgctgtcacaaccactgcacacctggccacaaccaggaacact
agtcccagccttggagagagcaggagacccaaggatcttcctccagtgaaggaccttgga
gccctacccagggaggggctgctggccccactgggtctgctggccatcctgaccttggca
gtagccacactgtatggactatccctggccacacctggggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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