KEGG   Pongo abelii (Sumatran orangutan): 100460986
Entry
100460986         CDS       T01416                                 
Symbol
NXF3
Name
(RefSeq) nuclear RNA export factor 3
  KO
K14284  nuclear RNA export factor
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03008  Ribosome biogenesis in eukaryotes
pon03013  Nucleocytoplasmic transport
pon03015  mRNA surveillance pathway
pon05014  Amyotrophic lateral sclerosis
pon05164  Influenza A
pon05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100460986 (NXF3)
   03015 mRNA surveillance pathway
    100460986 (NXF3)
   03008 Ribosome biogenesis in eukaryotes
    100460986 (NXF3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100460986 (NXF3)
   05168 Herpes simplex virus 1 infection
    100460986 (NXF3)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100460986 (NXF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100460986 (NXF3)
   03009 Ribosome biogenesis [BR:pon03009]
    100460986 (NXF3)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100460986 (NXF3)
   mRNA cycle factors
    Stress granule specific factors
     100460986 (NXF3)
Ribosome biogenesis [BR:pon03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    100460986 (NXF3)
SSDB
Motif
Pfam: Tap-RNA_bind NTF2
Other DBs
NCBI-GeneID: 100460986
NCBI-ProteinID: XP_024096650
Ensembl: ENSPPYG00000020574
Position
X:complement(97505175..97522344)
AA seq 531 aa
MSLPSGHNMGHTDQVVQRRARCWDIYQRRFSSRSEPVNPGMHSSSHQQQDGDAAMHGAHM
DSPVRYTPYAISPYNRKGSFRKQDQTHVNMEREQKPPERRMEGNMPDGTLGSWFKITVPF
GIKYNEKWLLNLIQNECSVPFVPVEFHYENMHASFFVENASIACALKNVSGKIWDENNEK
ISIFVNPAGIPHFVQRELKSEKVEQIKLAVNQPCDVSQEALDIQRLPFYPDMMNHDTTMA
SNPRKCMAASLHVHEENIPTVMSAGEMDKWKGIEPGEKCADRSPVCTTLSDNSSNINSIL
ELFPKLLCLDGQQSPRATLCGTEAHKRLPTCKGGFFGSEMLKNLVLQFLQQYYLIYDSGD
RQGLLSAYHDEACFSMSIPFNPEDSAPSSLCKYFKDSRNIKITKDPYLRGELLKHTKRDI
VDSLSALPKTQHDLSSFLVDMWCQTEWMLCFSVNGMFKEVEGQSQGSVLAFTRTFIATPG
SSSSLCIVNDKLFVWDTGHQGTQSALFTPVPTAFSSSVPAFSQEQQKTLPS
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgtcactgccttcaggacacaacatgggtcacactgatcaagttgttcaaagaagagca
agatgttgggatatttaccaaaggagatttagcagtaggtctgaacctgtcaatcctggc
atgcattcttcatcccatcagcagcaagatggagatgcagcaatgcatggtgcccacatg
gactctccagtaagatacactccctatgctatttcaccctataatcggaaaggcagtttt
cgtaaacaagaccaaacccatgttaacatggagagagagcaaaaacctccagagagaaga
atggaggggaacatgccggatgggaccttagggagctggttcaagatcacagttcccttc
ggcataaaatacaatgagaagtggctgctgaatttgattcagaacgaatgtagtgtaccc
ttcgtcccagttgagtttcactatgaaaacatgcatgccagcttctttgtggagaatgcc
agcatcgcctgtgcactgaagaatgtcagtggcaagatttgggatgagaataatgaaaag
atatcaatctttgtcaaccctgctggtataccccactttgtgcagagggagctaaagtca
gaaaaggtggagcagataaagctggccgtgaaccaaccgtgtgatgtctcccaggaagct
cttgatatccagagactcccattttacccagacatgatgaaccatgatactacaatggca
tcgaatcctagaaagtgcatggctgcctccctgcacgtccatgaagagaacatacctacg
gtgatgtctgcaggggagatggacaagtggaaagggatagagccaggagagaagtgtgcg
gacagaagcccagtgtgcacaaccttatcggataactccagcaacataaactccatcctg
gaattgttccccaaattattatgcctggatggccagcagtcacccagagcaactctatgt
ggtactgaagcccacaagaggttaccaacctgtaagggaggcttctttggatctgagatg
ttgaagaatctggtcctgcaattcctgcagcagtattacttgatctatgactctggagat
cgacagggtctccttagtgcttaccacgatgaggcctgcttctccatgagcattcccttc
aatcctgaggactcagccccgagcagcttgtgcaagtacttcaaggatagcaggaatata
aaaattaccaaggacccctacctgcggggggagctgctgaagcacacaaaacgtgatatt
gtggactccctcagtgcgttgcctaaaactcagcatgacctcagctccttcctggtggac
atgtggtgccagacggaatggatgctctgcttttctgtcaacgggatgttcaaggaagtg
gaaggacagtctcagggttctgttctcgccttcacccggaccttcattgctacccctggc
agcagttccagtctgtgcatcgtgaatgacaagctctttgtgtgggataccggccaccaa
gggacccagagtgccttgttcaccccagtgcccacagccttctccagctccgtgcctgcc
ttctcacaggagcagcagaaaacgctgccttcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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