KEGG   Populus trichocarpa (black cottonwood): 7462973
Entry
7462973           CDS       T01077                                 
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
  KO
K01662  1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00730  Thiamine metabolism
pop00900  Terpenoid backbone biosynthesis
pop01100  Metabolic pathways
pop01110  Biosynthesis of secondary metabolites
Module
pop_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    7462973
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    7462973
Enzymes [BR:pop01000]
 2. Transferases
  2.2  Transferring aldehyde or ketonic groups
   2.2.1  Transketolases and transaldolases
    2.2.1.7  1-deoxy-D-xylulose-5-phosphate synthase
     7462973
SSDB
Motif
Pfam: DXP_synthase_N Transket_pyr Transketolase_C E1_dh
Other DBs
NCBI-GeneID: 7462973
NCBI-ProteinID: XP_024445464
Position
18:complement(2328935..2335068)
AA seq 737 aa
MGTAIAQYPYGITSHSFVKFGHKLEISSSNCHYKVDISRFNLYPSSVSTTDSKVCVGRIR
ALPDIGDIFSDIIATPLLDVVENPIHLKNLTIKELKLLASEIRSELSSIMSKAQKDFKAS
LAAVELTVAIHHVFHAPVDKILWDVGEQARFAADSVLYGGLYSHQRADNSMLIGTYAHKI
LTGRRSLMRTLRQKDGLSGFTSRSESEYDPFGAGHGCNSISAGLGMAVARDIKGKRERIV
TVIGNGTTMAGQVYEAMGNAGYLDSNMIVILNDSRHSLHPKIEEGSKTSINALSSTLSKL
QSSKSFRRLREVAKGVTKRIGMYELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHN
IEDLVCVLQEVSTLESMGPVLIHVITEENQCAEHKQQTEATGNQQGGYAVLSNMHTQTYS
DCFVEALIMEAEKDKDIVVVHAGKEMEPSFQLFQERFPHRFFYVGMAEQHAVTFSAGLSC
GGLKPFCIIPSAFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGPDGPTMCGAFDITFMSC
LPNMIVMAPSDEDQLVDMVATAAHINDRPVCFRYPRGAIAGTDHYTRSGIPVEIGKGLTL
VEGKDVALLGYGTMVQNCLRAQTLLSKLGIEVTVADARFCKPLDMKLLRQLCENHAFLVT
VEEGSIGGFGSHVSQFIALDGQLDGRTKWRPIVLPDNYIEHALPNEQLALAGLTGHHIAA
TVLRLLGRSREALLLMC
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgggtactgcaattgctcagtacccatatggaattacttcacattcttttgtgaaattc
ggtcacaaattggagatttcaagctctaattgtcattataaagtggatatatcaagattt
aacttgtatcctagttctgtttccaccactgactccaaggtgtgtgttggtagaatacgt
gctctacctgatattggtgatatattttcggatattattgcaacaccattacttgatgtg
gttgaaaaccctatccacttgaagaatttaactattaaggaactgaaactattagctagt
gaaatacgatcagagttgtcttccataatgtcgaaggcacaaaaagactttaaggccagt
ctggcagcggttgaactgacagttgcaattcaccatgtttttcatgctccagtggacaag
atactgtgggatgttggggaacaagcaagattcgcagctgattctgttctttatggagga
ctgtatagtcatcaaagagcagataatagcatgcttatcgggacatatgcacataaaatt
ctcactggaaggagatctcttatgcgtacactaagacaaaaggatggtctttctggattt
acatctcggtctgagagtgaatatgacccgtttggagcaggacatggatgcaacagtatt
tctgctggacttggcatggcggttgctcgtgatattaaagggaagcgggaacgtattgtt
acagtcattggcaatggcacaactatggctggtcaggtctatgaagcaatgggcaatgca
ggctatttagactcaaatatgatagtgattttaaatgacagccgacactctttacacccc
aagattgaagagggctccaagacttcaatcaatgctctatcaagtaccctaagcaagctc
cagtcaagcaaatcattccggaggcttagagaagttgctaagggtgttaccaagaggata
ggtatgtatgaattagcagctaaagttgatgagtatgcacgtggtatgatgggtccactg
ggatcaactctcttcgaagaacttgggttgtactacataggccctgttgatggacacaat
attgaagatttagtttgtgttttacaagaagtgtcaactctggagtcaatgggtcctgtc
ttgatacatgtaataactgaagaaaatcagtgtgcagaacataagcaacagactgaggca
acggggaaccagcagggaggttatgcagtgctatccaatatgcatactcaaacatatagt
gattgctttgttgaggctctgatcatggaagcagagaaagacaaagatattgtggttgtt
catgcaggaaaggaaatggaaccatcatttcaactatttcaggaaagatttccacacagg
tttttttatgtgggaatggctgagcaacatgcagttacattttcagctggcttgtcatgc
ggggggttaaagccattttgcataattccttcagcttttctgcagagagcatatgaccag
gtggtccatgatgtagatcagcagagaattccagttcgctttgtcattacaagcgcggga
ttggtaggacctgatggtcctactatgtgtggagcatttgatataactttcatgtcatgc
ttgccaaacatgattgttatggcaccatcagatgaggatcagcttgtggacatggtggcg
actgcagcccatattaatgatcgtccagtttgctttcggtatccaaggggtgccattgct
ggaactgatcattatactcgtagtggtattcctgttgagattggaaagggattaactctt
gtagagggtaaagatgttgctttgcttgggtatggtacaatggttcagaactgcctcaga
gctcagacccttctttcaaagcttggcattgaggtaactgttgctgatgcaagattctgc
aagccacttgacatgaagcttctcagacagttatgcgaaaaccatgcctttctggtcaca
gtcgaggaaggctctattggaggatttgggtcccatgtttcacagttcattgcccttgat
gggcagcttgatggaagaactaagtggcggccaattgttttaccagacaattacattgaa
catgcactgccaaatgaacagcttgctcttgccgggctgactggacatcatattgctgca
acagtgctaagactgcttggtcgctcccgtgaagctctccttttgatgtgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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